Protein–RNA interactions for Protein: P53829

CAF40, Protein CAF40, yeastyeast

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF40P53829 EPT1YHR123W 1176 nt3.17□□□□□ -1.9
CAF40P53829 RNR2YJL026W 1200 nt3.17□□□□□ -1.9
CAF40P53829 MRPL49YJL096W 486 nt3.17□□□□□ -1.9
CAF40P53829 YJR111CYJR111C 852 nt3.17□□□□□ -1.9
CAF40P53829 ENT3YJR125C 1227 nt3.17□□□□□ -1.9
CAF40P53829 RDN58-1RDN58-1 158 nt3.17□□□□□ -1.9
CAF40P53829 RDN58-2RDN58-2 158 nt3.17□□□□□ -1.9
CAF40P53829 RHO5YNL180C 996 nt3.17□□□□□ -1.9
CAF40P53829 GIS2YNL255C 462 nt3.17□□□□□ -1.9
CAF40P53829 YBR090CYBR090C 369 nt3.17□□□□□ -1.9
CAF40P53829 POP7YBR167C 423 nt3.17□□□□□ -1.9
CAF40P53829 SLM2YNL047C 1971 nt3.17□□□□□ -1.9
CAF40P53829 YMR317WYMR317W 3423 nt3.16□□□□□ -1.9
CAF40P53829 TVP15YDR100W 432 nt3.16□□□□□ -1.9
CAF40P53829 YDR340WYDR340W 303 nt3.16□□□□□ -1.9
CAF40P53829 YFR009W-AYFR009W-A 258 nt3.16□□□□□ -1.9
CAF40P53829 YGL082WYGL082W 1146 nt3.16□□□□□ -1.9
CAF40P53829 YGR115CYGR115C 780 nt3.16□□□□□ -1.9
CAF40P53829 YHR182C-AYHR182C-A 474 nt3.16□□□□□ -1.9
CAF40P53829 RPS21AYKR057W 264 nt3.16□□□□□ -1.9
CAF40P53829 TVP18YMR071C 504 nt3.16□□□□□ -1.9
CAF40P53829 HUB1YNR032C-A 222 nt3.16□□□□□ -1.9
CAF40P53829 YPL135C-AYPL135C-A 174 nt3.16□□□□□ -1.9
CAF40P53829 YPR108W-AYPR108W-A 213 nt3.16□□□□□ -1.9
CAF40P53829 YPR136CYPR136C 513 nt3.16□□□□□ -1.9
CAF40P53829 RPN2YIL075C 2838 nt3.16□□□□□ -1.9
CAF40P53829 CDC5YMR001C 2118 nt3.16□□□□□ -1.9
CAF40P53829 WHI3YNL197C 1986 nt3.15□□□□□ -1.91
CAF40P53829 AAD3YCR107W 1092 nt3.15□□□□□ -1.91
CAF40P53829 YDR149CYDR149C 708 nt3.15□□□□□ -1.91
CAF40P53829 SWD2YKL018W 990 nt3.15□□□□□ -1.91
CAF40P53829 YAL056C-AYAL056C-A 351 nt3.15□□□□□ -1.91
CAF40P53829 VMA6YLR447C 1038 nt3.15□□□□□ -1.91
CAF40P53829 RIM11YMR139W 1113 nt3.15□□□□□ -1.91
CAF40P53829 YNL013CYNL013C 378 nt3.15□□□□□ -1.91
CAF40P53829 YBR016WYBR016W 387 nt3.15□□□□□ -1.91
CAF40P53829 FRE4YNR060W 2160 nt3.15□□□□□ -1.91
CAF40P53829 PWP2YCR057C 2772 nt3.15□□□□□ -1.91
CAF40P53829 RPN6YDL097C 1305 nt3.15□□□□□ -1.91
CAF40P53829 PKP2YGL059W 1476 nt3.15□□□□□ -1.91
CAF40P53829 SEC2YNL272C 2280 nt3.14□□□□□ -1.91
CAF40P53829 SLY41YOR307C 1362 nt3.14□□□□□ -1.91
CAF40P53829 FAR1YJL157C 2493 nt3.14□□□□□ -1.91
CAF40P53829 RRP42YDL111C 798 nt3.14□□□□□ -1.91
CAF40P53829 EMC2YJR088C 879 nt3.14□□□□□ -1.91
CAF40P53829 YSF3YNL138W-A 258 nt3.14□□□□□ -1.91
CAF40P53829 RRP15YPR143W 753 nt3.14□□□□□ -1.91
CAF40P53829 snR24snR24 89 nt3.14□□□□□ -1.91
CAF40P53829 CHA4YLR098C 1947 nt3.14□□□□□ -1.91
CAF40P53829 DOA4YDR069C 2781 nt3.14□□□□□ -1.91
CAF40P53829 USA1YML029W 2517 nt3.14□□□□□ -1.91
CAF40P53829 CSR2YPR030W 3366 nt3.14□□□□□ -1.91
CAF40P53829 LCB5YLR260W 2064 nt3.13□□□□□ -1.91
CAF40P53829 SNT1YCR033W 3681 nt3.13□□□□□ -1.91
CAF40P53829 ARO80YDR421W 2853 nt3.13□□□□□ -1.91
CAF40P53829 RCY1YJL204C 2523 nt3.13□□□□□ -1.91
CAF40P53829 YDL180WYDL180W 1644 nt3.13□□□□□ -1.91
CAF40P53829 HUL5YGL141W 2733 nt3.13□□□□□ -1.91
CAF40P53829 ERP3YDL018C 678 nt3.13□□□□□ -1.91
CAF40P53829 BUD25YER014C-A 462 nt3.13□□□□□ -1.91
CAF40P53829 tX(XXX)DtX(XXX)D 100 nt3.13□□□□□ -1.91
CAF40P53829 HIS5YIL116W 1158 nt3.13□□□□□ -1.91
CAF40P53829 YLR050CYLR050C 486 nt3.13□□□□□ -1.91
CAF40P53829 BUR2YLR226W 1188 nt3.13□□□□□ -1.91
CAF40P53829 YML116W-AYML116W-A 303 nt3.13□□□□□ -1.91
CAF40P53829 YMR087WYMR087W 855 nt3.13□□□□□ -1.91
CAF40P53829 LOA1YPR139C 903 nt3.13□□□□□ -1.91
CAF40P53829 YCL007CYCL007C 393 nt3.13□□□□□ -1.91
CAF40P53829 RAD18YCR066W 1464 nt3.13□□□□□ -1.91
CAF40P53829 CAF130YGR134W 3369 nt3.13□□□□□ -1.91
CAF40P53829 CPA2YJR109C 3357 nt3.13□□□□□ -1.91
CAF40P53829 SIN4YNL236W 2925 nt3.12□□□□□ -1.91
CAF40P53829 NGG1YDR176W 2109 nt3.12□□□□□ -1.91
CAF40P53829 YEL032C-AYEL032C-A 162 nt3.12□□□□□ -1.91
CAF40P53829 RMD6YEL072W 696 nt3.12□□□□□ -1.91
CAF40P53829 PGD1YGL025C 1194 nt3.12□□□□□ -1.91
CAF40P53829 YGL109WYGL109W 324 nt3.12□□□□□ -1.91
CAF40P53829 YHR097CYHR097C 1101 nt3.12□□□□□ -1.91
CAF40P53829 RGI2YIL057C 495 nt3.12□□□□□ -1.91
CAF40P53829 DPH1YIL103W 1278 nt3.12□□□□□ -1.91
CAF40P53829 YIL171W-AYIL171W-A 453 nt3.12□□□□□ -1.91
CAF40P53829 SNX4YJL036W 1272 nt3.12□□□□□ -1.91
CAF40P53829 YJL220WYJL220W 453 nt3.12□□□□□ -1.91
CAF40P53829 YMR010WYMR010W 1218 nt3.12□□□□□ -1.91
CAF40P53829 YMR105W-AYMR105W-A 195 nt3.12□□□□□ -1.91
CAF40P53829 BRX1YOL077C 876 nt3.12□□□□□ -1.91
CAF40P53829 RIB4YOL143C 510 nt3.12□□□□□ -1.91
CAF40P53829 YOR131CYOR131C 657 nt3.12□□□□□ -1.91
CAF40P53829 POL30YBR088C 777 nt3.12□□□□□ -1.91
CAF40P53829 YJL049WYJL049W 1353 nt3.12□□□□□ -1.91
CAF40P53829 PIG2YIL045W 1617 nt3.11□□□□□ -1.91
CAF40P53829 SIZ1YDR409W 2715 nt3.11□□□□□ -1.91
CAF40P53829 HDA2YDR295C 2025 nt3.11□□□□□ -1.91
CAF40P53829 FRQ1YDR373W 573 nt3.11□□□□□ -1.91
CAF40P53829 SEC4YFL005W 648 nt3.11□□□□□ -1.91
CAF40P53829 YFR010W-AYFR010W-A 189 nt3.11□□□□□ -1.91
CAF40P53829 YHR180WYHR180W 492 nt3.11□□□□□ -1.91
CAF40P53829 ERP1YAR002C-A 660 nt3.11□□□□□ -1.91
CAF40P53829 ATG33YLR356W 594 nt3.11□□□□□ -1.91
CAF40P53829 YLR364C-AYLR364C-A 123 nt3.11□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 36.1 ms