Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
UPK1BO75841 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1BO75841 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1BO75841 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1BO75841 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1BO75841 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
UPK1BO75841 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
UPK1BO75841 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
UPK1BO75841 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
UPK1BO75841 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1BO75841 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1BO75841 TNXA-203ENST00000507684 2038 ntBASIC18.53■□□□□ 0.56
UPK1BO75841 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.53■□□□□ 0.56
UPK1BO75841 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1BO75841 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1BO75841 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1BO75841 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
UPK1BO75841 AC006128.1-201ENST00000624704 1661 ntBASIC18.53■□□□□ 0.56
UPK1BO75841 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.53■□□□□ 0.56
UPK1BO75841 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
UPK1BO75841 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UPK1BO75841 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPK1BO75841 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.52■□□□□ 0.56
UPK1BO75841 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.52■□□□□ 0.56
UPK1BO75841 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK1BO75841 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK1BO75841 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPK1BO75841 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK1BO75841 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK1BO75841 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.52■□□□□ 0.56
UPK1BO75841 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.52■□□□□ 0.56
UPK1BO75841 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
UPK1BO75841 AC060814.1-201ENST00000554326 538 ntBASIC18.52■□□□□ 0.56
UPK1BO75841 AC026202.3-201ENST00000600805 1127 ntBASIC18.52■□□□□ 0.56
UPK1BO75841 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK1BO75841 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.52■□□□□ 0.56
UPK1BO75841 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK1BO75841 AC026471.6-201ENST00000622954 1905 ntBASIC18.52■□□□□ 0.56
UPK1BO75841 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.52■□□□□ 0.55
UPK1BO75841 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
UPK1BO75841 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPK1BO75841 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPK1BO75841 AC116562.4-201ENST00000641316 2276 ntBASIC18.52■□□□□ 0.55
UPK1BO75841 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.52■□□□□ 0.55
UPK1BO75841 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPK1BO75841 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPK1BO75841 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.52■□□□□ 0.55
UPK1BO75841 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1BO75841 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.51■□□□□ 0.55
UPK1BO75841 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1BO75841 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1BO75841 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1BO75841 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1BO75841 RAP2CP1-202ENST00000605179 643 ntBASIC18.51■□□□□ 0.55
UPK1BO75841 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1BO75841 AC112907.3-201ENST00000577781 2400 ntBASIC18.51■□□□□ 0.55
UPK1BO75841 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK1BO75841 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
UPK1BO75841 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
UPK1BO75841 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1BO75841 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1BO75841 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1BO75841 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1BO75841 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1BO75841 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
UPK1BO75841 AP000974.1-201ENST00000623909 2387 ntBASIC18.5■□□□□ 0.55
UPK1BO75841 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.5■□□□□ 0.55
UPK1BO75841 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1BO75841 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.5■□□□□ 0.55
UPK1BO75841 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.5■□□□□ 0.55
UPK1BO75841 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1BO75841 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1BO75841 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK1BO75841 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1BO75841 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1BO75841 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1BO75841 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
UPK1BO75841 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.49■□□□□ 0.55
UPK1BO75841 AC004408.2-201ENST00000623613 2777 ntBASIC18.49■□□□□ 0.55
UPK1BO75841 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1BO75841 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1BO75841 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1BO75841 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
UPK1BO75841 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1BO75841 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.49■□□□□ 0.55
UPK1BO75841 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.49■□□□□ 0.55
UPK1BO75841 AC092296.2-201ENST00000589470 999 ntBASIC18.49■□□□□ 0.55
UPK1BO75841 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1BO75841 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.49■□□□□ 0.55
UPK1BO75841 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1BO75841 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPK1BO75841 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK1BO75841 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK1BO75841 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.48■□□□□ 0.55
UPK1BO75841 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPK1BO75841 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.48■□□□□ 0.55
UPK1BO75841 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
UPK1BO75841 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK1BO75841 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.48■□□□□ 0.55
UPK1BO75841 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms