Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp42B2RQC2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp42B2RQC2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp42B2RQC2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Usp42B2RQC2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Usp42B2RQC2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Usp42B2RQC2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp42B2RQC2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp42B2RQC2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Usp42B2RQC2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp42B2RQC2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Usp42B2RQC2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Usp42B2RQC2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.93■■□□□ 1.1
Usp42B2RQC2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.93■■□□□ 1.1
Usp42B2RQC2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.93■■□□□ 1.1
Usp42B2RQC2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Usp42B2RQC2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Usp42B2RQC2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Usp42B2RQC2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Usp42B2RQC2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Usp42B2RQC2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Usp42B2RQC2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp42B2RQC2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp42B2RQC2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.92■■□□□ 1.1
Usp42B2RQC2 Gm37179-201ENSMUST00000194862 823 ntBASIC21.92■■□□□ 1.1
Usp42B2RQC2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
Usp42B2RQC2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.92■■□□□ 1.1
Usp42B2RQC2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp42B2RQC2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp42B2RQC2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp42B2RQC2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp42B2RQC2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Usp42B2RQC2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp42B2RQC2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Usp42B2RQC2 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.91■■□□□ 1.1
Usp42B2RQC2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Usp42B2RQC2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.91■■□□□ 1.1
Usp42B2RQC2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp42B2RQC2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp42B2RQC2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp42B2RQC2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp42B2RQC2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Usp42B2RQC2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
Usp42B2RQC2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp42B2RQC2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.9■■□□□ 1.1
Usp42B2RQC2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.9■■□□□ 1.1
Usp42B2RQC2 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.9■■□□□ 1.1
Usp42B2RQC2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp42B2RQC2 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.9■■□□□ 1.1
Usp42B2RQC2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp42B2RQC2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp42B2RQC2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp42B2RQC2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp42B2RQC2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp42B2RQC2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp42B2RQC2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp42B2RQC2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp42B2RQC2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp42B2RQC2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp42B2RQC2 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.89■■□□□ 1.1
Usp42B2RQC2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Usp42B2RQC2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.89■■□□□ 1.1
Usp42B2RQC2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Usp42B2RQC2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.89■■□□□ 1.1
Usp42B2RQC2 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.89■■□□□ 1.1
Usp42B2RQC2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Usp42B2RQC2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.89■■□□□ 1.09
Usp42B2RQC2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Usp42B2RQC2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Usp42B2RQC2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Usp42B2RQC2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Usp42B2RQC2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Usp42B2RQC2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Usp42B2RQC2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.88■■□□□ 1.09
Usp42B2RQC2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Usp42B2RQC2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Usp42B2RQC2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Usp42B2RQC2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Usp42B2RQC2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Usp42B2RQC2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Usp42B2RQC2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Usp42B2RQC2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Usp42B2RQC2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Usp42B2RQC2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Usp42B2RQC2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Usp42B2RQC2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Usp42B2RQC2 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.87■■□□□ 1.09
Usp42B2RQC2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Usp42B2RQC2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Usp42B2RQC2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Usp42B2RQC2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.86■■□□□ 1.09
Usp42B2RQC2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Usp42B2RQC2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Usp42B2RQC2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Usp42B2RQC2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Usp42B2RQC2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Usp42B2RQC2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Usp42B2RQC2 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.86■■□□□ 1.09
Usp42B2RQC2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Usp42B2RQC2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms