Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.17■□□□□ 0.98
TBC1D3FA6NER0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.17■□□□□ 0.98
TBC1D3FA6NER0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
TBC1D3FA6NER0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TBC1D3FA6NER0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.17■□□□□ 0.98
TBC1D3FA6NER0 C1orf229-201ENST00000623686 2258 ntBASIC21.17■□□□□ 0.98
TBC1D3FA6NER0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.17■□□□□ 0.98
TBC1D3FA6NER0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TBC1D3FA6NER0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TBC1D3FA6NER0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TBC1D3FA6NER0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.16■□□□□ 0.98
TBC1D3FA6NER0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TBC1D3FA6NER0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.16■□□□□ 0.98
TBC1D3FA6NER0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TBC1D3FA6NER0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
TBC1D3FA6NER0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.16■□□□□ 0.98
TBC1D3FA6NER0 AC013268.1-206ENST00000638368 961 ntBASIC21.16■□□□□ 0.98
TBC1D3FA6NER0 AC112229.1-201ENST00000639295 961 ntBASIC21.16■□□□□ 0.98
TBC1D3FA6NER0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
TBC1D3FA6NER0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TBC1D3FA6NER0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.15■□□□□ 0.98
TBC1D3FA6NER0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TBC1D3FA6NER0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.15■□□□□ 0.98
TBC1D3FA6NER0 AF201337.1-201ENST00000520239 748 ntBASIC21.15■□□□□ 0.98
TBC1D3FA6NER0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TBC1D3FA6NER0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.15■□□□□ 0.98
TBC1D3FA6NER0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.15■□□□□ 0.98
TBC1D3FA6NER0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TBC1D3FA6NER0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TBC1D3FA6NER0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TBC1D3FA6NER0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TBC1D3FA6NER0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
TBC1D3FA6NER0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TBC1D3FA6NER0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.14■□□□□ 0.97
TBC1D3FA6NER0 AC092053.2-201ENST00000640557 1818 ntBASIC21.14■□□□□ 0.97
TBC1D3FA6NER0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TBC1D3FA6NER0 POU5F1P4-201ENST00000413175 1085 ntBASIC21.14■□□□□ 0.97
TBC1D3FA6NER0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TBC1D3FA6NER0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
TBC1D3FA6NER0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.14■□□□□ 0.97
TBC1D3FA6NER0 AC105036.2-201ENST00000569468 176 ntBASIC21.14■□□□□ 0.97
TBC1D3FA6NER0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TBC1D3FA6NER0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.14■□□□□ 0.97
TBC1D3FA6NER0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TBC1D3FA6NER0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.13■□□□□ 0.97
TBC1D3FA6NER0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TBC1D3FA6NER0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.13■□□□□ 0.97
TBC1D3FA6NER0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
TBC1D3FA6NER0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.13■□□□□ 0.97
TBC1D3FA6NER0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.13■□□□□ 0.97
TBC1D3FA6NER0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TBC1D3FA6NER0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.13■□□□□ 0.97
TBC1D3FA6NER0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TBC1D3FA6NER0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TBC1D3FA6NER0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 AC142086.2-201ENST00000569753 217 ntBASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TBC1D3FA6NER0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D3FA6NER0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D3FA6NER0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.11■□□□□ 0.97
TBC1D3FA6NER0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D3FA6NER0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.11■□□□□ 0.97
TBC1D3FA6NER0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D3FA6NER0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D3FA6NER0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D3FA6NER0 AC080038.3-201ENST00000623346 1952 ntBASIC21.11■□□□□ 0.97
TBC1D3FA6NER0 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.11■□□□□ 0.97
TBC1D3FA6NER0 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.11■□□□□ 0.97
TBC1D3FA6NER0 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.11■□□□□ 0.97
TBC1D3FA6NER0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.11■□□□□ 0.97
TBC1D3FA6NER0 AC133552.2-202ENST00000575694 574 ntBASIC21.11■□□□□ 0.97
TBC1D3FA6NER0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D3FA6NER0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D3FA6NER0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.11■□□□□ 0.97
TBC1D3FA6NER0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D3FA6NER0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3FA6NER0 AC003102.1-202ENST00000563394 1796 ntBASIC21.1■□□□□ 0.97
TBC1D3FA6NER0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3FA6NER0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms