Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
4933424G06RikA0A140LIP3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
4933424G06RikA0A140LIP3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
4933424G06RikA0A140LIP3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
4933424G06RikA0A140LIP3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
4933424G06RikA0A140LIP3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
4933424G06RikA0A140LIP3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.08■□□□□ 0.64
4933424G06RikA0A140LIP3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
4933424G06RikA0A140LIP3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.08■□□□□ 0.64
4933424G06RikA0A140LIP3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
4933424G06RikA0A140LIP3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
4933424G06RikA0A140LIP3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
4933424G06RikA0A140LIP3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
4933424G06RikA0A140LIP3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
4933424G06RikA0A140LIP3 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.07■□□□□ 0.64
4933424G06RikA0A140LIP3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
4933424G06RikA0A140LIP3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
4933424G06RikA0A140LIP3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
4933424G06RikA0A140LIP3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
4933424G06RikA0A140LIP3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.07■□□□□ 0.64
4933424G06RikA0A140LIP3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
4933424G06RikA0A140LIP3 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.07■□□□□ 0.64
4933424G06RikA0A140LIP3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
4933424G06RikA0A140LIP3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
4933424G06RikA0A140LIP3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
4933424G06RikA0A140LIP3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
4933424G06RikA0A140LIP3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.06■□□□□ 0.64
4933424G06RikA0A140LIP3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
4933424G06RikA0A140LIP3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
4933424G06RikA0A140LIP3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
4933424G06RikA0A140LIP3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
4933424G06RikA0A140LIP3 Gm8520-201ENSMUST00000186517 868 ntBASIC19.06■□□□□ 0.64
4933424G06RikA0A140LIP3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
4933424G06RikA0A140LIP3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
4933424G06RikA0A140LIP3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
4933424G06RikA0A140LIP3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
4933424G06RikA0A140LIP3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
4933424G06RikA0A140LIP3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
4933424G06RikA0A140LIP3 Gm22240-201ENSMUST00000175225 82 ntBASIC19.05■□□□□ 0.64
4933424G06RikA0A140LIP3 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.05■□□□□ 0.64
4933424G06RikA0A140LIP3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
4933424G06RikA0A140LIP3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
4933424G06RikA0A140LIP3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.05■□□□□ 0.64
4933424G06RikA0A140LIP3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
4933424G06RikA0A140LIP3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
4933424G06RikA0A140LIP3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
4933424G06RikA0A140LIP3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.05■□□□□ 0.64
4933424G06RikA0A140LIP3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
4933424G06RikA0A140LIP3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
4933424G06RikA0A140LIP3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933424G06RikA0A140LIP3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933424G06RikA0A140LIP3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933424G06RikA0A140LIP3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933424G06RikA0A140LIP3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
4933424G06RikA0A140LIP3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
4933424G06RikA0A140LIP3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
4933424G06RikA0A140LIP3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933424G06RikA0A140LIP3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.04■□□□□ 0.64
4933424G06RikA0A140LIP3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933424G06RikA0A140LIP3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933424G06RikA0A140LIP3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
4933424G06RikA0A140LIP3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933424G06RikA0A140LIP3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933424G06RikA0A140LIP3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933424G06RikA0A140LIP3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933424G06RikA0A140LIP3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
4933424G06RikA0A140LIP3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
4933424G06RikA0A140LIP3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 Gm37856-201ENSMUST00000191634 999 ntBASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 Trmt13-210ENSMUST00000198454 880 ntBASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
4933424G06RikA0A140LIP3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.02■□□□□ 0.64
4933424G06RikA0A140LIP3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
4933424G06RikA0A140LIP3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
4933424G06RikA0A140LIP3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
4933424G06RikA0A140LIP3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.02■□□□□ 0.64
4933424G06RikA0A140LIP3 Gm13168-201ENSMUST00000121771 632 ntBASIC19.02■□□□□ 0.64
4933424G06RikA0A140LIP3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
4933424G06RikA0A140LIP3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
4933424G06RikA0A140LIP3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.02■□□□□ 0.64
4933424G06RikA0A140LIP3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
4933424G06RikA0A140LIP3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
4933424G06RikA0A140LIP3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
4933424G06RikA0A140LIP3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
4933424G06RikA0A140LIP3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms