Protein–RNA interactions for Protein: Q9R013

Ctsf, Cathepsin F, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtsfQ9R013 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CtsfQ9R013 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CtsfQ9R013 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CtsfQ9R013 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CtsfQ9R013 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CtsfQ9R013 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.32■□□□□ 0.84
CtsfQ9R013 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CtsfQ9R013 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.32■□□□□ 0.84
CtsfQ9R013 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CtsfQ9R013 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CtsfQ9R013 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.32■□□□□ 0.84
CtsfQ9R013 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CtsfQ9R013 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CtsfQ9R013 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CtsfQ9R013 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.32■□□□□ 0.84
CtsfQ9R013 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CtsfQ9R013 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CtsfQ9R013 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
CtsfQ9R013 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
CtsfQ9R013 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CtsfQ9R013 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.31■□□□□ 0.84
CtsfQ9R013 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CtsfQ9R013 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.31■□□□□ 0.84
CtsfQ9R013 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CtsfQ9R013 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CtsfQ9R013 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
CtsfQ9R013 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CtsfQ9R013 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CtsfQ9R013 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CtsfQ9R013 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CtsfQ9R013 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.31■□□□□ 0.84
CtsfQ9R013 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CtsfQ9R013 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CtsfQ9R013 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CtsfQ9R013 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CtsfQ9R013 Rab3c-203ENSMUST00000224180 967 ntBASIC20.3■□□□□ 0.84
CtsfQ9R013 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CtsfQ9R013 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CtsfQ9R013 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CtsfQ9R013 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CtsfQ9R013 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CtsfQ9R013 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CtsfQ9R013 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CtsfQ9R013 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CtsfQ9R013 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
CtsfQ9R013 Gm10252-201ENSMUST00000209541 832 ntBASIC20.29■□□□□ 0.84
CtsfQ9R013 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CtsfQ9R013 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.29■□□□□ 0.84
CtsfQ9R013 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CtsfQ9R013 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CtsfQ9R013 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
CtsfQ9R013 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CtsfQ9R013 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.28■□□□□ 0.84
CtsfQ9R013 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.28■□□□□ 0.84
CtsfQ9R013 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CtsfQ9R013 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CtsfQ9R013 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CtsfQ9R013 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CtsfQ9R013 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CtsfQ9R013 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CtsfQ9R013 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CtsfQ9R013 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CtsfQ9R013 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CtsfQ9R013 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CtsfQ9R013 Trmt13-210ENSMUST00000198454 880 ntBASIC20.27■□□□□ 0.84
CtsfQ9R013 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CtsfQ9R013 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.27■□□□□ 0.84
CtsfQ9R013 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.27■□□□□ 0.84
CtsfQ9R013 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CtsfQ9R013 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CtsfQ9R013 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CtsfQ9R013 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.27■□□□□ 0.83
CtsfQ9R013 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CtsfQ9R013 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CtsfQ9R013 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CtsfQ9R013 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.26■□□□□ 0.83
CtsfQ9R013 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CtsfQ9R013 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.26■□□□□ 0.83
CtsfQ9R013 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.26■□□□□ 0.83
CtsfQ9R013 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CtsfQ9R013 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CtsfQ9R013 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CtsfQ9R013 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CtsfQ9R013 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CtsfQ9R013 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CtsfQ9R013 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CtsfQ9R013 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CtsfQ9R013 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CtsfQ9R013 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CtsfQ9R013 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CtsfQ9R013 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.25■□□□□ 0.83
CtsfQ9R013 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CtsfQ9R013 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CtsfQ9R013 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CtsfQ9R013 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CtsfQ9R013 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CtsfQ9R013 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CtsfQ9R013 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
CtsfQ9R013 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CtsfQ9R013 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms