Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 AP004607.4-201ENST00000530158 1459 ntBASIC22.67■■□□□ 1.22
TWNKQ96RR1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.67■■□□□ 1.22
TWNKQ96RR1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.67■■□□□ 1.22
TWNKQ96RR1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.67■■□□□ 1.22
TWNKQ96RR1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TWNKQ96RR1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
TWNKQ96RR1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.67■■□□□ 1.22
TWNKQ96RR1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.67■■□□□ 1.22
TWNKQ96RR1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.67■■□□□ 1.22
TWNKQ96RR1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.67■■□□□ 1.22
TWNKQ96RR1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.67■■□□□ 1.22
TWNKQ96RR1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.67■■□□□ 1.22
TWNKQ96RR1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TWNKQ96RR1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.67■■□□□ 1.22
TWNKQ96RR1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.67■■□□□ 1.22
TWNKQ96RR1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TWNKQ96RR1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TWNKQ96RR1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TWNKQ96RR1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TWNKQ96RR1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TWNKQ96RR1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TWNKQ96RR1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TWNKQ96RR1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
TWNKQ96RR1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
TWNKQ96RR1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TWNKQ96RR1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.66■■□□□ 1.22
TWNKQ96RR1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.66■■□□□ 1.22
TWNKQ96RR1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TWNKQ96RR1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
TWNKQ96RR1 FBXW4P1-201ENST00000426721 2239 ntBASIC22.66■■□□□ 1.22
TWNKQ96RR1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TWNKQ96RR1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TWNKQ96RR1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TWNKQ96RR1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.66■■□□□ 1.22
TWNKQ96RR1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.65■■□□□ 1.22
TWNKQ96RR1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.65■■□□□ 1.22
TWNKQ96RR1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.65■■□□□ 1.22
TWNKQ96RR1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.65■■□□□ 1.22
TWNKQ96RR1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TWNKQ96RR1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TWNKQ96RR1 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.65■■□□□ 1.22
TWNKQ96RR1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TWNKQ96RR1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TWNKQ96RR1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TWNKQ96RR1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.65■■□□□ 1.22
TWNKQ96RR1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
TWNKQ96RR1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TWNKQ96RR1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.65■■□□□ 1.22
TWNKQ96RR1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TWNKQ96RR1 KRT87P-202ENST00000534226 1464 ntBASIC22.65■■□□□ 1.22
TWNKQ96RR1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TWNKQ96RR1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.65■■□□□ 1.22
TWNKQ96RR1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
TWNKQ96RR1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
TWNKQ96RR1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TWNKQ96RR1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TWNKQ96RR1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.64■■□□□ 1.21
TWNKQ96RR1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.64■■□□□ 1.21
TWNKQ96RR1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.64■■□□□ 1.21
TWNKQ96RR1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.64■■□□□ 1.21
TWNKQ96RR1 NTF6G-201ENST00000591094 616 ntBASIC22.64■■□□□ 1.21
TWNKQ96RR1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.64■■□□□ 1.21
TWNKQ96RR1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.64■■□□□ 1.21
TWNKQ96RR1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TWNKQ96RR1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TWNKQ96RR1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
TWNKQ96RR1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
TWNKQ96RR1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.63■■□□□ 1.21
TWNKQ96RR1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.63■■□□□ 1.21
TWNKQ96RR1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TWNKQ96RR1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TWNKQ96RR1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.63■■□□□ 1.21
TWNKQ96RR1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TWNKQ96RR1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
TWNKQ96RR1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TWNKQ96RR1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
TWNKQ96RR1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TWNKQ96RR1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.63■■□□□ 1.21
TWNKQ96RR1 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.63■■□□□ 1.21
TWNKQ96RR1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TWNKQ96RR1 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.63■■□□□ 1.21
TWNKQ96RR1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TWNKQ96RR1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TWNKQ96RR1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
TWNKQ96RR1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TWNKQ96RR1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TWNKQ96RR1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TWNKQ96RR1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.62■■□□□ 1.21
TWNKQ96RR1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TWNKQ96RR1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TWNKQ96RR1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.62■■□□□ 1.21
TWNKQ96RR1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TWNKQ96RR1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.62■■□□□ 1.21
TWNKQ96RR1 EEF1DP3-203ENST00000566025 782 ntBASIC22.62■■□□□ 1.21
TWNKQ96RR1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.62■■□□□ 1.21
TWNKQ96RR1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
TWNKQ96RR1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TWNKQ96RR1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.62■■□□□ 1.21
TWNKQ96RR1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TWNKQ96RR1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms