Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.56■□□□□ 0.88
LINC01555Q8NAE3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
LINC01555Q8NAE3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.56■□□□□ 0.88
LINC01555Q8NAE3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC01555Q8NAE3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.56■□□□□ 0.88
LINC01555Q8NAE3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.56■□□□□ 0.88
LINC01555Q8NAE3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LINC01555Q8NAE3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC01555Q8NAE3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC01555Q8NAE3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.56■□□□□ 0.88
LINC01555Q8NAE3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LINC01555Q8NAE3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LINC01555Q8NAE3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC01555Q8NAE3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC01555Q8NAE3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC01555Q8NAE3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
LINC01555Q8NAE3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
LINC01555Q8NAE3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LINC01555Q8NAE3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.55■□□□□ 0.88
LINC01555Q8NAE3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.55■□□□□ 0.88
LINC01555Q8NAE3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.55■□□□□ 0.88
LINC01555Q8NAE3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC01555Q8NAE3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC01555Q8NAE3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.55■□□□□ 0.88
LINC01555Q8NAE3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC01555Q8NAE3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
LINC01555Q8NAE3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
LINC01555Q8NAE3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC01555Q8NAE3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC01555Q8NAE3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC01555Q8NAE3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC01555Q8NAE3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.54■□□□□ 0.88
LINC01555Q8NAE3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC01555Q8NAE3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.54■□□□□ 0.88
LINC01555Q8NAE3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.54■□□□□ 0.88
LINC01555Q8NAE3 EEF1DP3-203ENST00000566025 782 ntBASIC20.54■□□□□ 0.88
LINC01555Q8NAE3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC01555Q8NAE3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LINC01555Q8NAE3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC01555Q8NAE3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
LINC01555Q8NAE3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC01555Q8NAE3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC01555Q8NAE3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC01555Q8NAE3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LINC01555Q8NAE3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC01555Q8NAE3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC01555Q8NAE3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.53■□□□□ 0.88
LINC01555Q8NAE3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.53■□□□□ 0.88
LINC01555Q8NAE3 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.53■□□□□ 0.88
LINC01555Q8NAE3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.53■□□□□ 0.88
LINC01555Q8NAE3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.53■□□□□ 0.88
LINC01555Q8NAE3 AC104187.1-201ENST00000607510 612 ntBASIC20.53■□□□□ 0.88
LINC01555Q8NAE3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC01555Q8NAE3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC01555Q8NAE3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.53■□□□□ 0.88
LINC01555Q8NAE3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC01555Q8NAE3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC01555Q8NAE3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.52■□□□□ 0.88
LINC01555Q8NAE3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC01555Q8NAE3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC01555Q8NAE3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.52■□□□□ 0.88
LINC01555Q8NAE3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC01555Q8NAE3 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.52■□□□□ 0.88
LINC01555Q8NAE3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.52■□□□□ 0.88
LINC01555Q8NAE3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LINC01555Q8NAE3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
LINC01555Q8NAE3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
LINC01555Q8NAE3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LINC01555Q8NAE3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.51■□□□□ 0.87
LINC01555Q8NAE3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC01555Q8NAE3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LINC01555Q8NAE3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LINC01555Q8NAE3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC01555Q8NAE3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LINC01555Q8NAE3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.51■□□□□ 0.87
LINC01555Q8NAE3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.51■□□□□ 0.87
LINC01555Q8NAE3 AC053503.5-201ENST00000601508 636 ntBASIC20.51■□□□□ 0.87
LINC01555Q8NAE3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LINC01555Q8NAE3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LINC01555Q8NAE3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LINC01555Q8NAE3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC01555Q8NAE3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC01555Q8NAE3 AC079834.2-201ENST00000609776 1949 ntBASIC20.51■□□□□ 0.87
LINC01555Q8NAE3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC01555Q8NAE3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC01555Q8NAE3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.5■□□□□ 0.87
LINC01555Q8NAE3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC01555Q8NAE3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LINC01555Q8NAE3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC01555Q8NAE3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC01555Q8NAE3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.5■□□□□ 0.87
LINC01555Q8NAE3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LINC01555Q8NAE3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.5■□□□□ 0.87
LINC01555Q8NAE3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.5■□□□□ 0.87
LINC01555Q8NAE3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.5■□□□□ 0.87
LINC01555Q8NAE3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.5■□□□□ 0.87
LINC01555Q8NAE3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC01555Q8NAE3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC01555Q8NAE3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
LINC01555Q8NAE3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms