Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
XRN1Q8IZH2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
XRN1Q8IZH2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
XRN1Q8IZH2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
XRN1Q8IZH2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
XRN1Q8IZH2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
XRN1Q8IZH2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
XRN1Q8IZH2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
XRN1Q8IZH2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
XRN1Q8IZH2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC29.97■■■□□ 2.39
XRN1Q8IZH2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC29.97■■■□□ 2.39
XRN1Q8IZH2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC29.97■■■□□ 2.39
XRN1Q8IZH2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
XRN1Q8IZH2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
XRN1Q8IZH2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
XRN1Q8IZH2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
XRN1Q8IZH2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
XRN1Q8IZH2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
XRN1Q8IZH2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
XRN1Q8IZH2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
XRN1Q8IZH2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC29.96■■■□□ 2.39
XRN1Q8IZH2 AC243732.1-201ENST00000612648 864 ntBASIC29.96■■■□□ 2.39
XRN1Q8IZH2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
XRN1Q8IZH2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
XRN1Q8IZH2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
XRN1Q8IZH2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
XRN1Q8IZH2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
XRN1Q8IZH2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC29.96■■■□□ 2.39
XRN1Q8IZH2 AC073648.6-201ENST00000641589 218 ntBASIC29.96■■■□□ 2.39
XRN1Q8IZH2 ANOS2P-203ENST00000472227 1816 ntBASIC29.96■■■□□ 2.39
XRN1Q8IZH2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
XRN1Q8IZH2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC29.95■■■□□ 2.39
XRN1Q8IZH2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
XRN1Q8IZH2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC29.95■■■□□ 2.39
XRN1Q8IZH2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
XRN1Q8IZH2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC29.95■■■□□ 2.39
XRN1Q8IZH2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC29.95■■■□□ 2.38
XRN1Q8IZH2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC29.95■■■□□ 2.38
XRN1Q8IZH2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC29.95■■■□□ 2.38
XRN1Q8IZH2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC29.95■■■□□ 2.38
XRN1Q8IZH2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC29.95■■■□□ 2.38
XRN1Q8IZH2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.38
XRN1Q8IZH2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC29.94■■■□□ 2.38
XRN1Q8IZH2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC29.94■■■□□ 2.38
XRN1Q8IZH2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC29.94■■■□□ 2.38
XRN1Q8IZH2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC29.94■■■□□ 2.38
XRN1Q8IZH2 AC008403.3-201ENST00000598924 454 ntBASIC29.94■■■□□ 2.38
XRN1Q8IZH2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
XRN1Q8IZH2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
XRN1Q8IZH2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
XRN1Q8IZH2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC29.94■■■□□ 2.38
XRN1Q8IZH2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
XRN1Q8IZH2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
XRN1Q8IZH2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC29.94■■■□□ 2.38
XRN1Q8IZH2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
XRN1Q8IZH2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
XRN1Q8IZH2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
XRN1Q8IZH2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC29.93■■■□□ 2.38
XRN1Q8IZH2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
XRN1Q8IZH2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
XRN1Q8IZH2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC29.93■■■□□ 2.38
XRN1Q8IZH2 RPS2P4-201ENST00000476944 856 ntBASIC29.93■■■□□ 2.38
XRN1Q8IZH2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC29.93■■■□□ 2.38
XRN1Q8IZH2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC29.93■■■□□ 2.38
XRN1Q8IZH2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
XRN1Q8IZH2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC29.93■■■□□ 2.38
XRN1Q8IZH2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC29.92■■■□□ 2.38
XRN1Q8IZH2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
XRN1Q8IZH2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
XRN1Q8IZH2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC29.92■■■□□ 2.38
XRN1Q8IZH2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC29.92■■■□□ 2.38
XRN1Q8IZH2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC29.92■■■□□ 2.38
XRN1Q8IZH2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
XRN1Q8IZH2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
XRN1Q8IZH2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
XRN1Q8IZH2 SERPINH1P1-201ENST00000419794 1249 ntBASIC29.91■■■□□ 2.38
XRN1Q8IZH2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
XRN1Q8IZH2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC29.91■■■□□ 2.38
XRN1Q8IZH2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
XRN1Q8IZH2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC29.91■■■□□ 2.38
XRN1Q8IZH2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
XRN1Q8IZH2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC29.91■■■□□ 2.38
XRN1Q8IZH2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC29.9■■■□□ 2.38
XRN1Q8IZH2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
XRN1Q8IZH2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC29.9■■■□□ 2.38
XRN1Q8IZH2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC29.9■■■□□ 2.38
XRN1Q8IZH2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC29.89■■■□□ 2.38
XRN1Q8IZH2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
XRN1Q8IZH2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC29.89■■■□□ 2.38
XRN1Q8IZH2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
XRN1Q8IZH2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
XRN1Q8IZH2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.38
XRN1Q8IZH2 AC008175.2-201ENST00000612840 297 ntBASIC29.89■■■□□ 2.38
XRN1Q8IZH2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
XRN1Q8IZH2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC29.89■■■□□ 2.38
XRN1Q8IZH2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
XRN1Q8IZH2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
XRN1Q8IZH2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
XRN1Q8IZH2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
XRN1Q8IZH2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms