Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Alx1Q8C8B0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Alx1Q8C8B0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Alx1Q8C8B0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Alx1Q8C8B0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Alx1Q8C8B0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Alx1Q8C8B0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Alx1Q8C8B0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Alx1Q8C8B0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Alx1Q8C8B0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Alx1Q8C8B0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Alx1Q8C8B0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Alx1Q8C8B0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Alx1Q8C8B0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Alx1Q8C8B0 Rncr4-201ENSMUST00000194541 2234 ntBASIC22.01■■□□□ 1.11
Alx1Q8C8B0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Alx1Q8C8B0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC22.01■■□□□ 1.11
Alx1Q8C8B0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Alx1Q8C8B0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Alx1Q8C8B0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Alx1Q8C8B0 Gm43672-201ENSMUST00000199072 1731 ntBASIC22■■□□□ 1.11
Alx1Q8C8B0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Alx1Q8C8B0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Alx1Q8C8B0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22■■□□□ 1.11
Alx1Q8C8B0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC22■■□□□ 1.11
Alx1Q8C8B0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC22■■□□□ 1.11
Alx1Q8C8B0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC22■■□□□ 1.11
Alx1Q8C8B0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Alx1Q8C8B0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Alx1Q8C8B0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Alx1Q8C8B0 Gm10616-201ENSMUST00000205285 2127 ntBASIC22■■□□□ 1.11
Alx1Q8C8B0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Alx1Q8C8B0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Alx1Q8C8B0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Alx1Q8C8B0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Alx1Q8C8B0 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.99■■□□□ 1.11
Alx1Q8C8B0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.99■■□□□ 1.11
Alx1Q8C8B0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Alx1Q8C8B0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Alx1Q8C8B0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.99■■□□□ 1.11
Alx1Q8C8B0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Alx1Q8C8B0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Alx1Q8C8B0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Alx1Q8C8B0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Alx1Q8C8B0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Alx1Q8C8B0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.99■■□□□ 1.11
Alx1Q8C8B0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
Alx1Q8C8B0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Alx1Q8C8B0 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.98■■□□□ 1.11
Alx1Q8C8B0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Alx1Q8C8B0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Alx1Q8C8B0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Alx1Q8C8B0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.98■■□□□ 1.11
Alx1Q8C8B0 Gm10602-201ENSMUST00000098239 609 ntBASIC21.98■■□□□ 1.11
Alx1Q8C8B0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Alx1Q8C8B0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Alx1Q8C8B0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Alx1Q8C8B0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Alx1Q8C8B0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Alx1Q8C8B0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Alx1Q8C8B0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Alx1Q8C8B0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Alx1Q8C8B0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Alx1Q8C8B0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Alx1Q8C8B0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Alx1Q8C8B0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Alx1Q8C8B0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Alx1Q8C8B0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.96■■□□□ 1.11
Alx1Q8C8B0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Alx1Q8C8B0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Alx1Q8C8B0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Alx1Q8C8B0 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.96■■□□□ 1.11
Alx1Q8C8B0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Alx1Q8C8B0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.96■■□□□ 1.11
Alx1Q8C8B0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Alx1Q8C8B0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.96■■□□□ 1.11
Alx1Q8C8B0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Alx1Q8C8B0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Alx1Q8C8B0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Alx1Q8C8B0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.11
Alx1Q8C8B0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.95■■□□□ 1.1
Alx1Q8C8B0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Alx1Q8C8B0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.95■■□□□ 1.1
Alx1Q8C8B0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Alx1Q8C8B0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Alx1Q8C8B0 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.95■■□□□ 1.1
Alx1Q8C8B0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Alx1Q8C8B0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Alx1Q8C8B0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Alx1Q8C8B0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Alx1Q8C8B0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Alx1Q8C8B0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
Alx1Q8C8B0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Alx1Q8C8B0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Alx1Q8C8B0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Alx1Q8C8B0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Alx1Q8C8B0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Alx1Q8C8B0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Alx1Q8C8B0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Alx1Q8C8B0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms