Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scube3Q66PY1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Scube3Q66PY1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scube3Q66PY1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.67■□□□□ 0.74
Scube3Q66PY1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scube3Q66PY1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.67■□□□□ 0.74
Scube3Q66PY1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scube3Q66PY1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scube3Q66PY1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scube3Q66PY1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scube3Q66PY1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scube3Q66PY1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scube3Q66PY1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scube3Q66PY1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scube3Q66PY1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scube3Q66PY1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scube3Q66PY1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Scube3Q66PY1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Scube3Q66PY1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Scube3Q66PY1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scube3Q66PY1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scube3Q66PY1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.66■□□□□ 0.74
Scube3Q66PY1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scube3Q66PY1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scube3Q66PY1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scube3Q66PY1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scube3Q66PY1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.66■□□□□ 0.74
Scube3Q66PY1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scube3Q66PY1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scube3Q66PY1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scube3Q66PY1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scube3Q66PY1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scube3Q66PY1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.65■□□□□ 0.74
Scube3Q66PY1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scube3Q66PY1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scube3Q66PY1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.65■□□□□ 0.74
Scube3Q66PY1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scube3Q66PY1 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.65■□□□□ 0.74
Scube3Q66PY1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scube3Q66PY1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scube3Q66PY1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Scube3Q66PY1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Scube3Q66PY1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scube3Q66PY1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Scube3Q66PY1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.64■□□□□ 0.73
Scube3Q66PY1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scube3Q66PY1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scube3Q66PY1 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.64■□□□□ 0.73
Scube3Q66PY1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scube3Q66PY1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scube3Q66PY1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scube3Q66PY1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scube3Q66PY1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scube3Q66PY1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Scube3Q66PY1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Scube3Q66PY1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Scube3Q66PY1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scube3Q66PY1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
Scube3Q66PY1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Scube3Q66PY1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scube3Q66PY1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scube3Q66PY1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scube3Q66PY1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scube3Q66PY1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scube3Q66PY1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scube3Q66PY1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scube3Q66PY1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scube3Q66PY1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scube3Q66PY1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scube3Q66PY1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scube3Q66PY1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scube3Q66PY1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scube3Q66PY1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scube3Q66PY1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.62■□□□□ 0.73
Scube3Q66PY1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Scube3Q66PY1 Iqck-206ENSMUST00000208658 2891 ntBASIC19.62■□□□□ 0.73
Scube3Q66PY1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scube3Q66PY1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scube3Q66PY1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scube3Q66PY1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Scube3Q66PY1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scube3Q66PY1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Scube3Q66PY1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scube3Q66PY1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scube3Q66PY1 Gm12933-201ENSMUST00000120203 872 ntBASIC19.61■□□□□ 0.73
Scube3Q66PY1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Scube3Q66PY1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Scube3Q66PY1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scube3Q66PY1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scube3Q66PY1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Scube3Q66PY1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scube3Q66PY1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scube3Q66PY1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Scube3Q66PY1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scube3Q66PY1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scube3Q66PY1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Scube3Q66PY1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scube3Q66PY1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Scube3Q66PY1 Gm10602-201ENSMUST00000098239 609 ntBASIC19.6■□□□□ 0.73
Scube3Q66PY1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms