Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim63Q38HM4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim63Q38HM4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim63Q38HM4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim63Q38HM4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim63Q38HM4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim63Q38HM4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim63Q38HM4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim63Q38HM4 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.56■□□□□ 0.08
Trim63Q38HM4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim63Q38HM4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trim63Q38HM4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim63Q38HM4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim63Q38HM4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim63Q38HM4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trim63Q38HM4 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Trim63Q38HM4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim63Q38HM4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim63Q38HM4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim63Q38HM4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim63Q38HM4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trim63Q38HM4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim63Q38HM4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.55■□□□□ 0.08
Trim63Q38HM4 Gm45855-201ENSMUST00000212546 880 ntBASIC15.55■□□□□ 0.08
Trim63Q38HM4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim63Q38HM4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Trim63Q38HM4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim63Q38HM4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim63Q38HM4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim63Q38HM4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim63Q38HM4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim63Q38HM4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim63Q38HM4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim63Q38HM4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim63Q38HM4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim63Q38HM4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim63Q38HM4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim63Q38HM4 Gm9812-201ENSMUST00000061934 968 ntBASIC15.54■□□□□ 0.08
Trim63Q38HM4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim63Q38HM4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim63Q38HM4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim63Q38HM4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim63Q38HM4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.54■□□□□ 0.08
Trim63Q38HM4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.54■□□□□ 0.08
Trim63Q38HM4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim63Q38HM4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim63Q38HM4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Trim63Q38HM4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim63Q38HM4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim63Q38HM4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim63Q38HM4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim63Q38HM4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim63Q38HM4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim63Q38HM4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim63Q38HM4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim63Q38HM4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim63Q38HM4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim63Q38HM4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim63Q38HM4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim63Q38HM4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim63Q38HM4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim63Q38HM4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim63Q38HM4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim63Q38HM4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim63Q38HM4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
Trim63Q38HM4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim63Q38HM4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim63Q38HM4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trim63Q38HM4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim63Q38HM4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC15.52■□□□□ 0.08
Trim63Q38HM4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim63Q38HM4 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.52■□□□□ 0.07
Trim63Q38HM4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Trim63Q38HM4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim63Q38HM4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.52■□□□□ 0.07
Trim63Q38HM4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim63Q38HM4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trim63Q38HM4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trim63Q38HM4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trim63Q38HM4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim63Q38HM4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim63Q38HM4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trim63Q38HM4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim63Q38HM4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.51■□□□□ 0.07
Trim63Q38HM4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim63Q38HM4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim63Q38HM4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim63Q38HM4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim63Q38HM4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim63Q38HM4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim63Q38HM4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim63Q38HM4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.51■□□□□ 0.07
Trim63Q38HM4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim63Q38HM4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.5■□□□□ 0.07
Trim63Q38HM4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim63Q38HM4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim63Q38HM4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim63Q38HM4 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.5■□□□□ 0.07
Trim63Q38HM4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trim63Q38HM4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms