Protein–RNA interactions for Protein: Q05789

ATG38, Autophagy-related protein 38, yeastyeast

Known RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG38Q05789 tL(CAA)DtL(CAA)D 82 nt2.91□□□□□ -1.94
ATG38Q05789 tL(CAA)G1tL(CAA)G1 82 nt2.91□□□□□ -1.94
ATG38Q05789 SUP54tL(CAA)G2 82 nt2.91□□□□□ -1.94
ATG38Q05789 tL(CAA)G3tL(CAA)G3 82 nt2.91□□□□□ -1.94
ATG38Q05789 tL(CAA)KtL(CAA)K 82 nt2.91□□□□□ -1.94
ATG38Q05789 tL(CAA)LtL(CAA)L 82 nt2.91□□□□□ -1.94
ATG38Q05789 tL(CAA)MtL(CAA)M 82 nt2.91□□□□□ -1.94
ATG38Q05789 tL(CAA)NtL(CAA)N 82 nt2.91□□□□□ -1.94
ATG38Q05789 RPL17BYJL177W 555 nt2.91□□□□□ -1.94
ATG38Q05789 YJR128WYJR128W 360 nt2.91□□□□□ -1.94
ATG38Q05789 VMA5YKL080W 1179 nt2.91□□□□□ -1.94
ATG38Q05789 YMR1YJR110W 2067 nt2.91□□□□□ -1.94
ATG38Q05789 RGC1YPR115W 3252 nt2.9□□□□□ -1.94
ATG38Q05789 MSA1YOR066W 1890 nt2.9□□□□□ -1.94
ATG38Q05789 YPS6YIR039C 1614 nt2.9□□□□□ -1.94
ATG38Q05789 TFB2YPL122C 1542 nt2.9□□□□□ -1.95
ATG38Q05789 FMP32YFL046W 624 nt2.9□□□□□ -1.95
ATG38Q05789 AGE2YIL044C 897 nt2.9□□□□□ -1.95
ATG38Q05789 AIM26YKL037W 357 nt2.9□□□□□ -1.95
ATG38Q05789 SDH3YKL141W 597 nt2.9□□□□□ -1.95
ATG38Q05789 PIR1YKL164C 1026 nt2.9□□□□□ -1.95
ATG38Q05789 snR42snR42 351 nt2.9□□□□□ -1.95
ATG38Q05789 YOR296WYOR296W 3870 nt2.9□□□□□ -1.95
ATG38Q05789 BNA4YBL098W 1383 nt2.89□□□□□ -1.95
ATG38Q05789 RMD1YDL001W 1293 nt2.89□□□□□ -1.95
ATG38Q05789 YKL156C-AYKL156C-A 117 nt2.89□□□□□ -1.95
ATG38Q05789 GTT2YLL060C 702 nt2.89□□□□□ -1.95
ATG38Q05789 RPL6AYML073C 531 nt2.89□□□□□ -1.95
ATG38Q05789 PPA2YMR267W 933 nt2.89□□□□□ -1.95
ATG38Q05789 YMR310CYMR310C 954 nt2.89□□□□□ -1.95
ATG38Q05789 YKL100CYKL100C 1764 nt2.89□□□□□ -1.95
ATG38Q05789 CLB5YPR120C 1308 nt2.89□□□□□ -1.95
ATG38Q05789 ABD1YBR236C 1311 nt2.89□□□□□ -1.95
ATG38Q05789 SRB8YCR081W 4284 nt2.88□□□□□ -1.95
ATG38Q05789 YGR039WYGR039W 312 nt2.88□□□□□ -1.95
ATG38Q05789 PEX21YGR239C 867 nt2.88□□□□□ -1.95
ATG38Q05789 YIL175WYIL175W 318 nt2.88□□□□□ -1.95
ATG38Q05789 YJL222W-BYJL222W-B 138 nt2.88□□□□□ -1.95
ATG38Q05789 YOR062CYOR062C 807 nt2.88□□□□□ -1.95
ATG38Q05789 YOR073W-AYOR073W-A 234 nt2.88□□□□□ -1.95
ATG38Q05789 VTC4YJL012C 2166 nt2.88□□□□□ -1.95
ATG38Q05789 STE24YJR117W 1362 nt2.87□□□□□ -1.95
ATG38Q05789 DBP7YKR024C 2229 nt2.87□□□□□ -1.95
ATG38Q05789 YDR133CYDR133C 336 nt2.87□□□□□ -1.95
ATG38Q05789 tQ(UUG)BtQ(UUG)B 72 nt2.87□□□□□ -1.95
ATG38Q05789 DAD2YKR083C 402 nt2.87□□□□□ -1.95
ATG38Q05789 MRPL33YMR286W 261 nt2.87□□□□□ -1.95
ATG38Q05789 YNL203CYNL203C 612 nt2.87□□□□□ -1.95
ATG38Q05789 UAF30YOR295W 687 nt2.87□□□□□ -1.95
ATG38Q05789 HAP4YKL109W 1665 nt2.87□□□□□ -1.95
ATG38Q05789 CEX1YOR112W 2286 nt2.87□□□□□ -1.95
ATG38Q05789 DBP10YDL031W 2988 nt2.87□□□□□ -1.95
ATG38Q05789 EAP1YKL204W 1899 nt2.86□□□□□ -1.95
ATG38Q05789 NFT1YKR103W 3657 nt2.86□□□□□ -1.95
ATG38Q05789 YDR355CYDR355C 303 nt2.86□□□□□ -1.95
ATG38Q05789 CFD1YIL003W 882 nt2.86□□□□□ -1.95
ATG38Q05789 EMC2YJR088C 879 nt2.86□□□□□ -1.95
ATG38Q05789 MRPL16YBL038W 699 nt2.86□□□□□ -1.95
ATG38Q05789 MED11YMR112C 396 nt2.86□□□□□ -1.95
ATG38Q05789 YBL081WYBL081W 1107 nt2.86□□□□□ -1.95
ATG38Q05789 MCA1YOR197W 1299 nt2.86□□□□□ -1.95
ATG38Q05789 RPA43YOR340C 981 nt2.86□□□□□ -1.95
ATG38Q05789 OXR1YPL196W 822 nt2.86□□□□□ -1.95
ATG38Q05789 BNI4YNL233W 2679 nt2.86□□□□□ -1.95
ATG38Q05789 VHR2YER064C 1518 nt2.86□□□□□ -1.95
ATG38Q05789 FLO11YIR019C 4104 nt2.86□□□□□ -1.95
ATG38Q05789 JJJ1YNL227C 1773 nt2.86□□□□□ -1.95
ATG38Q05789 21S_rRNA21S_rRNA 3296 nt2.85□□□□□ -1.95
ATG38Q05789 YDR034C-DYDR034C-D 5313 nt2.85□□□□□ -1.95
ATG38Q05789 YCL076WYCL076W 744 nt2.85□□□□□ -1.95
ATG38Q05789 YDR535CYDR535C 501 nt2.85□□□□□ -1.95
ATG38Q05789 SDS3YIL084C 984 nt2.85□□□□□ -1.95
ATG38Q05789 SFH5YJL145W 885 nt2.85□□□□□ -1.95
ATG38Q05789 RPN13YLR421C 471 nt2.85□□□□□ -1.95
ATG38Q05789 TEM1YML064C 738 nt2.85□□□□□ -1.95
ATG38Q05789 YBL039W-BYBL039W-B 180 nt2.85□□□□□ -1.95
ATG38Q05789 INP52YNL106C 3552 nt2.85□□□□□ -1.95
ATG38Q05789 TCB2YNL087W 3537 nt2.85□□□□□ -1.95
ATG38Q05789 YDR239CYDR239C 2364 nt2.85□□□□□ -1.95
ATG38Q05789 DUN1YDL101C 1542 nt2.84□□□□□ -1.95
ATG38Q05789 ARF1YDL192W 546 nt2.84□□□□□ -1.95
ATG38Q05789 YER066C-AYER066C-A 501 nt2.84□□□□□ -1.95
ATG38Q05789 ERG26YGL001C 1050 nt2.84□□□□□ -1.95
ATG38Q05789 RPL27AYHR010W 411 nt2.84□□□□□ -1.95
ATG38Q05789 DOG1YHR044C 741 nt2.84□□□□□ -1.95
ATG38Q05789 PPX1YHR201C 1194 nt2.84□□□□□ -1.95
ATG38Q05789 RSM26YJR101W 801 nt2.84□□□□□ -1.95
ATG38Q05789 YAR075WYAR075W 474 nt2.84□□□□□ -1.95
ATG38Q05789 YNL067W-AYNL067W-A 147 nt2.84□□□□□ -1.95
ATG38Q05789 ISW1YBR245C 3390 nt2.84□□□□□ -1.96
ATG38Q05789 CBP2YHL038C 1893 nt2.84□□□□□ -1.96
ATG38Q05789 HUL5YGL141W 2733 nt2.84□□□□□ -1.96
ATG38Q05789 ACA1YER045C 1470 nt2.84□□□□□ -1.96
ATG38Q05789 YIL169CYIL169C 2988 nt2.83□□□□□ -1.96
ATG38Q05789 NFI1YOR156C 2181 nt2.83□□□□□ -1.96
ATG38Q05789 HTA1YDR225W 399 nt2.83□□□□□ -1.96
ATG38Q05789 PRP18YGR006W 756 nt2.83□□□□□ -1.96
ATG38Q05789 TCD1YHR003C 1290 nt2.83□□□□□ -1.96
ATG38Q05789 YIL054WYIL054W 318 nt2.83□□□□□ -1.96
ATG38Q05789 SFH1YLR321C 1281 nt2.83□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 41 ms