Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Cacna1aP97445 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1aP97445 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1aP97445 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1aP97445 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1aP97445 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1aP97445 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.31■□□□□ 0.36
Cacna1aP97445 Gm13158-201ENSMUST00000122007 736 ntBASIC17.31■□□□□ 0.36
Cacna1aP97445 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1aP97445 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1aP97445 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1aP97445 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1aP97445 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.31■□□□□ 0.36
Cacna1aP97445 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1aP97445 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1aP97445 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cacna1aP97445 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.3■□□□□ 0.36
Cacna1aP97445 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.3■□□□□ 0.36
Cacna1aP97445 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1aP97445 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1aP97445 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1aP97445 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1aP97445 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.3■□□□□ 0.36
Cacna1aP97445 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.3■□□□□ 0.36
Cacna1aP97445 Gm18666-201ENSMUST00000190039 958 ntBASIC17.3■□□□□ 0.36
Cacna1aP97445 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Cacna1aP97445 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.3■□□□□ 0.36
Cacna1aP97445 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.3■□□□□ 0.36
Cacna1aP97445 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.3■□□□□ 0.36
Cacna1aP97445 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cacna1aP97445 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1aP97445 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cacna1aP97445 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1aP97445 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1aP97445 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1aP97445 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.29■□□□□ 0.36
Cacna1aP97445 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1aP97445 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1aP97445 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cacna1aP97445 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.29■□□□□ 0.36
Cacna1aP97445 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1aP97445 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cacna1aP97445 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Cacna1aP97445 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.29■□□□□ 0.36
Cacna1aP97445 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1aP97445 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1aP97445 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1aP97445 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1aP97445 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1aP97445 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.28■□□□□ 0.36
Cacna1aP97445 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1aP97445 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1aP97445 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1aP97445 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1aP97445 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1aP97445 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1aP97445 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1aP97445 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1aP97445 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1aP97445 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Cacna1aP97445 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.28■□□□□ 0.36
Cacna1aP97445 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.28■□□□□ 0.36
Cacna1aP97445 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1aP97445 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1aP97445 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1aP97445 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1aP97445 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1aP97445 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.27■□□□□ 0.36
Cacna1aP97445 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Cacna1aP97445 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1aP97445 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1aP97445 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cacna1aP97445 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cacna1aP97445 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cacna1aP97445 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cacna1aP97445 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cacna1aP97445 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.26■□□□□ 0.35
Cacna1aP97445 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.26■□□□□ 0.35
Cacna1aP97445 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1aP97445 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1aP97445 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1aP97445 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.26■□□□□ 0.35
Cacna1aP97445 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1aP97445 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1aP97445 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.26■□□□□ 0.35
Cacna1aP97445 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1aP97445 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.26■□□□□ 0.35
Cacna1aP97445 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1aP97445 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1aP97445 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cacna1aP97445 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1aP97445 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1aP97445 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.25■□□□□ 0.35
Cacna1aP97445 Gm6659-201ENSMUST00000174752 547 ntBASIC17.25■□□□□ 0.35
Cacna1aP97445 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.25■□□□□ 0.35
Cacna1aP97445 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.25■□□□□ 0.35
Cacna1aP97445 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1aP97445 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1aP97445 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1aP97445 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms