Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.93■□□□□ 0.62
CSNK1A1P48729 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSNK1A1P48729 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSNK1A1P48729 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSNK1A1P48729 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CSNK1A1P48729 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.93■□□□□ 0.62
CSNK1A1P48729 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.93■□□□□ 0.62
CSNK1A1P48729 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CSNK1A1P48729 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSNK1A1P48729 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSNK1A1P48729 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSNK1A1P48729 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.92■□□□□ 0.62
CSNK1A1P48729 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSNK1A1P48729 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSNK1A1P48729 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CSNK1A1P48729 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.92■□□□□ 0.62
CSNK1A1P48729 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSNK1A1P48729 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.92■□□□□ 0.62
CSNK1A1P48729 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSNK1A1P48729 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSNK1A1P48729 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.91■□□□□ 0.62
CSNK1A1P48729 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.91■□□□□ 0.62
CSNK1A1P48729 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CSNK1A1P48729 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSNK1A1P48729 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSNK1A1P48729 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.91■□□□□ 0.62
CSNK1A1P48729 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CSNK1A1P48729 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CSNK1A1P48729 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSNK1A1P48729 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSNK1A1P48729 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSNK1A1P48729 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.91■□□□□ 0.62
CSNK1A1P48729 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CSNK1A1P48729 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSNK1A1P48729 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
CSNK1A1P48729 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.91■□□□□ 0.62
CSNK1A1P48729 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSNK1A1P48729 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSNK1A1P48729 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.9■□□□□ 0.62
CSNK1A1P48729 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CSNK1A1P48729 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CSNK1A1P48729 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CSNK1A1P48729 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.9■□□□□ 0.62
CSNK1A1P48729 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CSNK1A1P48729 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.9■□□□□ 0.62
CSNK1A1P48729 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.9■□□□□ 0.62
CSNK1A1P48729 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.9■□□□□ 0.62
CSNK1A1P48729 MIR6084-201ENST00000622012 110 ntBASIC18.9■□□□□ 0.62
CSNK1A1P48729 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CSNK1A1P48729 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.9■□□□□ 0.62
CSNK1A1P48729 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSNK1A1P48729 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CSNK1A1P48729 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSNK1A1P48729 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CSNK1A1P48729 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CSNK1A1P48729 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CSNK1A1P48729 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.89■□□□□ 0.61
CSNK1A1P48729 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSNK1A1P48729 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSNK1A1P48729 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSNK1A1P48729 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CSNK1A1P48729 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.89■□□□□ 0.61
CSNK1A1P48729 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.89■□□□□ 0.61
CSNK1A1P48729 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.89■□□□□ 0.61
CSNK1A1P48729 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSNK1A1P48729 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.89■□□□□ 0.61
CSNK1A1P48729 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.89■□□□□ 0.61
CSNK1A1P48729 AC005224.4-201ENST00000583262 1652 ntBASIC18.89■□□□□ 0.61
CSNK1A1P48729 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CSNK1A1P48729 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CSNK1A1P48729 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CSNK1A1P48729 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSNK1A1P48729 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.88■□□□□ 0.61
CSNK1A1P48729 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSNK1A1P48729 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.88■□□□□ 0.61
CSNK1A1P48729 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSNK1A1P48729 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CSNK1A1P48729 AC244015.2-201ENST00000616358 1861 ntBASIC18.88■□□□□ 0.61
CSNK1A1P48729 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.88■□□□□ 0.61
CSNK1A1P48729 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1A1P48729 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1A1P48729 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1A1P48729 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.87■□□□□ 0.61
CSNK1A1P48729 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1A1P48729 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1A1P48729 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1A1P48729 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CSNK1A1P48729 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1A1P48729 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1A1P48729 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1A1P48729 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.87■□□□□ 0.61
CSNK1A1P48729 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.87■□□□□ 0.61
CSNK1A1P48729 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.87■□□□□ 0.61
CSNK1A1P48729 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.87■□□□□ 0.61
CSNK1A1P48729 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.87■□□□□ 0.61
CSNK1A1P48729 AC003102.1-202ENST00000563394 1796 ntBASIC18.87■□□□□ 0.61
CSNK1A1P48729 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.87■□□□□ 0.61
CSNK1A1P48729 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1A1P48729 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CSNK1A1P48729 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms