Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1BO75841 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1BO75841 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.59■□□□□ 0.57
UPK1BO75841 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1BO75841 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1BO75841 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1BO75841 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1BO75841 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1BO75841 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1BO75841 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1BO75841 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1BO75841 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1BO75841 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1BO75841 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.59■□□□□ 0.57
UPK1BO75841 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1BO75841 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPK1BO75841 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
UPK1BO75841 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPK1BO75841 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
UPK1BO75841 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.58■□□□□ 0.57
UPK1BO75841 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.58■□□□□ 0.57
UPK1BO75841 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.58■□□□□ 0.57
UPK1BO75841 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
UPK1BO75841 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
UPK1BO75841 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.58■□□□□ 0.57
UPK1BO75841 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPK1BO75841 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
UPK1BO75841 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UPK1BO75841 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.58■□□□□ 0.56
UPK1BO75841 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.58■□□□□ 0.56
UPK1BO75841 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.58■□□□□ 0.56
UPK1BO75841 AC104564.3-201ENST00000582367 638 ntBASIC18.58■□□□□ 0.56
UPK1BO75841 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPK1BO75841 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.58■□□□□ 0.56
UPK1BO75841 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPK1BO75841 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPK1BO75841 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
UPK1BO75841 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.58■□□□□ 0.56
UPK1BO75841 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UPK1BO75841 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
UPK1BO75841 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1BO75841 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.57■□□□□ 0.56
UPK1BO75841 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
UPK1BO75841 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1BO75841 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.57■□□□□ 0.56
UPK1BO75841 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1BO75841 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.57■□□□□ 0.56
UPK1BO75841 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.57■□□□□ 0.56
UPK1BO75841 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1BO75841 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
UPK1BO75841 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.57■□□□□ 0.56
UPK1BO75841 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1BO75841 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1BO75841 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1BO75841 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1BO75841 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
UPK1BO75841 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
UPK1BO75841 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1BO75841 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1BO75841 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1BO75841 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1BO75841 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPK1BO75841 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
UPK1BO75841 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.56■□□□□ 0.56
UPK1BO75841 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
UPK1BO75841 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPK1BO75841 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPK1BO75841 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.56■□□□□ 0.56
UPK1BO75841 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
UPK1BO75841 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPK1BO75841 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPK1BO75841 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPK1BO75841 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPK1BO75841 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1BO75841 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.55■□□□□ 0.56
UPK1BO75841 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
UPK1BO75841 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1BO75841 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1BO75841 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1BO75841 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1BO75841 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
UPK1BO75841 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1BO75841 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1BO75841 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1BO75841 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
UPK1BO75841 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.55■□□□□ 0.56
UPK1BO75841 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1BO75841 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1BO75841 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1BO75841 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1BO75841 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.55■□□□□ 0.56
UPK1BO75841 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1BO75841 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
UPK1BO75841 C17orf82-201ENST00000623772 1530 ntBASIC18.54■□□□□ 0.56
UPK1BO75841 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1BO75841 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1BO75841 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1BO75841 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1BO75841 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1BO75841 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms