Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
4933424G06RikA0A140LIP3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
4933424G06RikA0A140LIP3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
4933424G06RikA0A140LIP3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
4933424G06RikA0A140LIP3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
4933424G06RikA0A140LIP3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
4933424G06RikA0A140LIP3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.16■□□□□ 0.66
4933424G06RikA0A140LIP3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
4933424G06RikA0A140LIP3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
4933424G06RikA0A140LIP3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
4933424G06RikA0A140LIP3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
4933424G06RikA0A140LIP3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
4933424G06RikA0A140LIP3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
4933424G06RikA0A140LIP3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
4933424G06RikA0A140LIP3 Gm12527-201ENSMUST00000117967 564 ntBASIC19.15■□□□□ 0.66
4933424G06RikA0A140LIP3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.15■□□□□ 0.66
4933424G06RikA0A140LIP3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
4933424G06RikA0A140LIP3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
4933424G06RikA0A140LIP3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.15■□□□□ 0.66
4933424G06RikA0A140LIP3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
4933424G06RikA0A140LIP3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
4933424G06RikA0A140LIP3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.15■□□□□ 0.66
4933424G06RikA0A140LIP3 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.15■□□□□ 0.66
4933424G06RikA0A140LIP3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
4933424G06RikA0A140LIP3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
4933424G06RikA0A140LIP3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
4933424G06RikA0A140LIP3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
4933424G06RikA0A140LIP3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
4933424G06RikA0A140LIP3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
4933424G06RikA0A140LIP3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
4933424G06RikA0A140LIP3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
4933424G06RikA0A140LIP3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
4933424G06RikA0A140LIP3 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.14■□□□□ 0.65
4933424G06RikA0A140LIP3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
4933424G06RikA0A140LIP3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
4933424G06RikA0A140LIP3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
4933424G06RikA0A140LIP3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
4933424G06RikA0A140LIP3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
4933424G06RikA0A140LIP3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.14■□□□□ 0.65
4933424G06RikA0A140LIP3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
4933424G06RikA0A140LIP3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
4933424G06RikA0A140LIP3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
4933424G06RikA0A140LIP3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
4933424G06RikA0A140LIP3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
4933424G06RikA0A140LIP3 Rab3c-203ENSMUST00000224180 967 ntBASIC19.13■□□□□ 0.65
4933424G06RikA0A140LIP3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
4933424G06RikA0A140LIP3 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.13■□□□□ 0.65
4933424G06RikA0A140LIP3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
4933424G06RikA0A140LIP3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
4933424G06RikA0A140LIP3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
4933424G06RikA0A140LIP3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
4933424G06RikA0A140LIP3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
4933424G06RikA0A140LIP3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
4933424G06RikA0A140LIP3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933424G06RikA0A140LIP3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933424G06RikA0A140LIP3 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.12■□□□□ 0.65
4933424G06RikA0A140LIP3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933424G06RikA0A140LIP3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933424G06RikA0A140LIP3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933424G06RikA0A140LIP3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
4933424G06RikA0A140LIP3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.12■□□□□ 0.65
4933424G06RikA0A140LIP3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933424G06RikA0A140LIP3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.12■□□□□ 0.65
4933424G06RikA0A140LIP3 Gm20049-201ENSMUST00000219950 730 ntBASIC19.12■□□□□ 0.65
4933424G06RikA0A140LIP3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933424G06RikA0A140LIP3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933424G06RikA0A140LIP3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933424G06RikA0A140LIP3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933424G06RikA0A140LIP3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
4933424G06RikA0A140LIP3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
4933424G06RikA0A140LIP3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
4933424G06RikA0A140LIP3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
4933424G06RikA0A140LIP3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.11■□□□□ 0.65
4933424G06RikA0A140LIP3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
4933424G06RikA0A140LIP3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
4933424G06RikA0A140LIP3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
4933424G06RikA0A140LIP3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
4933424G06RikA0A140LIP3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
4933424G06RikA0A140LIP3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
4933424G06RikA0A140LIP3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
4933424G06RikA0A140LIP3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
4933424G06RikA0A140LIP3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
4933424G06RikA0A140LIP3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
4933424G06RikA0A140LIP3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
4933424G06RikA0A140LIP3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.1■□□□□ 0.65
4933424G06RikA0A140LIP3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.1■□□□□ 0.65
4933424G06RikA0A140LIP3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
4933424G06RikA0A140LIP3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
4933424G06RikA0A140LIP3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
4933424G06RikA0A140LIP3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
4933424G06RikA0A140LIP3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
4933424G06RikA0A140LIP3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
4933424G06RikA0A140LIP3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
4933424G06RikA0A140LIP3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.09■□□□□ 0.65
4933424G06RikA0A140LIP3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.09■□□□□ 0.65
4933424G06RikA0A140LIP3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
4933424G06RikA0A140LIP3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
4933424G06RikA0A140LIP3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
4933424G06RikA0A140LIP3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
4933424G06RikA0A140LIP3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms