Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.7■□□□□ 0.42
Rnf138Q9CQE0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf138Q9CQE0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf138Q9CQE0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf138Q9CQE0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf138Q9CQE0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.69■□□□□ 0.42
Rnf138Q9CQE0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.69■□□□□ 0.42
Rnf138Q9CQE0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.69■□□□□ 0.42
Rnf138Q9CQE0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf138Q9CQE0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf138Q9CQE0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.69■□□□□ 0.42
Rnf138Q9CQE0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf138Q9CQE0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf138Q9CQE0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf138Q9CQE0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf138Q9CQE0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf138Q9CQE0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf138Q9CQE0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf138Q9CQE0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf138Q9CQE0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf138Q9CQE0 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.68■□□□□ 0.42
Rnf138Q9CQE0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf138Q9CQE0 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.68■□□□□ 0.42
Rnf138Q9CQE0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf138Q9CQE0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf138Q9CQE0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf138Q9CQE0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf138Q9CQE0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rnf138Q9CQE0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf138Q9CQE0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf138Q9CQE0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf138Q9CQE0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf138Q9CQE0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rnf138Q9CQE0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf138Q9CQE0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Rnf138Q9CQE0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.67■□□□□ 0.42
Rnf138Q9CQE0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf138Q9CQE0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf138Q9CQE0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf138Q9CQE0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf138Q9CQE0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf138Q9CQE0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf138Q9CQE0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf138Q9CQE0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf138Q9CQE0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf138Q9CQE0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf138Q9CQE0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf138Q9CQE0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf138Q9CQE0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf138Q9CQE0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rnf138Q9CQE0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf138Q9CQE0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.66■□□□□ 0.42
Rnf138Q9CQE0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf138Q9CQE0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf138Q9CQE0 Gm44549-201ENSMUST00000208351 577 ntBASIC17.66■□□□□ 0.42
Rnf138Q9CQE0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf138Q9CQE0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rnf138Q9CQE0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rnf138Q9CQE0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf138Q9CQE0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rnf138Q9CQE0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf138Q9CQE0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rnf138Q9CQE0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf138Q9CQE0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.65■□□□□ 0.42
Rnf138Q9CQE0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf138Q9CQE0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf138Q9CQE0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf138Q9CQE0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf138Q9CQE0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rnf138Q9CQE0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.65■□□□□ 0.42
Rnf138Q9CQE0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf138Q9CQE0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf138Q9CQE0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf138Q9CQE0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf138Q9CQE0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf138Q9CQE0 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.65■□□□□ 0.42
Rnf138Q9CQE0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rnf138Q9CQE0 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.64■□□□□ 0.42
Rnf138Q9CQE0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf138Q9CQE0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf138Q9CQE0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf138Q9CQE0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf138Q9CQE0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.64■□□□□ 0.41
Rnf138Q9CQE0 Gm20760-201ENSMUST00000179197 648 ntBASIC17.64■□□□□ 0.41
Rnf138Q9CQE0 Gm37856-201ENSMUST00000191634 999 ntBASIC17.64■□□□□ 0.41
Rnf138Q9CQE0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.64■□□□□ 0.41
Rnf138Q9CQE0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf138Q9CQE0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf138Q9CQE0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf138Q9CQE0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf138Q9CQE0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf138Q9CQE0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf138Q9CQE0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf138Q9CQE0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf138Q9CQE0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf138Q9CQE0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf138Q9CQE0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf138Q9CQE0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf138Q9CQE0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf138Q9CQE0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms