Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-2Q9C056 AC098818.2-201ENST00000564925 2320 ntBASIC17.24■□□□□ 0.35
NKX6-2Q9C056 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-2Q9C056 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-2Q9C056 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-2Q9C056 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-2Q9C056 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
NKX6-2Q9C056 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
NKX6-2Q9C056 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-2Q9C056 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-2Q9C056 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NKX6-2Q9C056 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.24■□□□□ 0.35
NKX6-2Q9C056 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 PCDHAC2-203ENST00000615316 3011 ntBASIC17.23■□□□□ 0.35
NKX6-2Q9C056 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX6-2Q9C056 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NKX6-2Q9C056 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NKX6-2Q9C056 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NKX6-2Q9C056 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NKX6-2Q9C056 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NKX6-2Q9C056 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.22■□□□□ 0.35
NKX6-2Q9C056 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NKX6-2Q9C056 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.22■□□□□ 0.35
NKX6-2Q9C056 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NKX6-2Q9C056 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NKX6-2Q9C056 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NKX6-2Q9C056 AC016575.1-201ENST00000607026 382 ntBASIC17.22■□□□□ 0.35
NKX6-2Q9C056 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NKX6-2Q9C056 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.22■□□□□ 0.35
NKX6-2Q9C056 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 RPS2P35-201ENST00000443417 897 ntBASIC17.21■□□□□ 0.35
NKX6-2Q9C056 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX6-2Q9C056 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.21■□□□□ 0.34
NKX6-2Q9C056 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.21■□□□□ 0.34
NKX6-2Q9C056 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NKX6-2Q9C056 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NKX6-2Q9C056 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NKX6-2Q9C056 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX6-2Q9C056 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NKX6-2Q9C056 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NKX6-2Q9C056 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX6-2Q9C056 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX6-2Q9C056 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NKX6-2Q9C056 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.2■□□□□ 0.34
NKX6-2Q9C056 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX6-2Q9C056 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX6-2Q9C056 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX6-2Q9C056 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.2■□□□□ 0.34
NKX6-2Q9C056 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX6-2Q9C056 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX6-2Q9C056 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX6-2Q9C056 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX6-2Q9C056 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NKX6-2Q9C056 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NKX6-2Q9C056 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NKX6-2Q9C056 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NKX6-2Q9C056 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
NKX6-2Q9C056 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms