Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim33Q99PP7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim33Q99PP7 Reep4-203ENSMUST00000226563 1444 ntBASIC18.57■□□□□ 0.56
Trim33Q99PP7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim33Q99PP7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.57■□□□□ 0.56
Trim33Q99PP7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim33Q99PP7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim33Q99PP7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim33Q99PP7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trim33Q99PP7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trim33Q99PP7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim33Q99PP7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim33Q99PP7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.57■□□□□ 0.56
Trim33Q99PP7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trim33Q99PP7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim33Q99PP7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim33Q99PP7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Trim33Q99PP7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim33Q99PP7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim33Q99PP7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim33Q99PP7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Gm38205-201ENSMUST00000192243 258 ntBASIC18.56■□□□□ 0.56
Trim33Q99PP7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim33Q99PP7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.55■□□□□ 0.56
Trim33Q99PP7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.55■□□□□ 0.56
Trim33Q99PP7 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.55■□□□□ 0.56
Trim33Q99PP7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim33Q99PP7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
Trim33Q99PP7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim33Q99PP7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim33Q99PP7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim33Q99PP7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trim33Q99PP7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.55■□□□□ 0.56
Trim33Q99PP7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim33Q99PP7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trim33Q99PP7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim33Q99PP7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trim33Q99PP7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim33Q99PP7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim33Q99PP7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim33Q99PP7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim33Q99PP7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim33Q99PP7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim33Q99PP7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim33Q99PP7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim33Q99PP7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.54■□□□□ 0.56
Trim33Q99PP7 Gm8495-201ENSMUST00000188740 694 ntBASIC18.54■□□□□ 0.56
Trim33Q99PP7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.54■□□□□ 0.56
Trim33Q99PP7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim33Q99PP7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim33Q99PP7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim33Q99PP7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim33Q99PP7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.54■□□□□ 0.56
Trim33Q99PP7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim33Q99PP7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim33Q99PP7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim33Q99PP7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.53■□□□□ 0.56
Trim33Q99PP7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim33Q99PP7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim33Q99PP7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Trim33Q99PP7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.53■□□□□ 0.56
Trim33Q99PP7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim33Q99PP7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim33Q99PP7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim33Q99PP7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.53■□□□□ 0.56
Trim33Q99PP7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim33Q99PP7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.53■□□□□ 0.56
Trim33Q99PP7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim33Q99PP7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim33Q99PP7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim33Q99PP7 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.52■□□□□ 0.56
Trim33Q99PP7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim33Q99PP7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trim33Q99PP7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim33Q99PP7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim33Q99PP7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trim33Q99PP7 Gm13234-201ENSMUST00000120010 747 ntBASIC18.52■□□□□ 0.56
Trim33Q99PP7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.52■□□□□ 0.56
Trim33Q99PP7 Gm42778-201ENSMUST00000199644 553 ntBASIC18.52■□□□□ 0.56
Trim33Q99PP7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim33Q99PP7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim33Q99PP7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trim33Q99PP7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 109.1 ms