Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CHCHD1Q96BP2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
CHCHD1Q96BP2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHCHD1Q96BP2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHCHD1Q96BP2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.55■□□□□ 0.08
CHCHD1Q96BP2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHCHD1Q96BP2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CHCHD1Q96BP2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHCHD1Q96BP2 AC104564.3-201ENST00000582367 638 ntBASIC15.55■□□□□ 0.08
CHCHD1Q96BP2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHCHD1Q96BP2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHCHD1Q96BP2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHCHD1Q96BP2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.55■□□□□ 0.08
CHCHD1Q96BP2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 CA15P2-201ENST00000611168 834 ntBASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.54■□□□□ 0.08
CHCHD1Q96BP2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.53■□□□□ 0.08
CHCHD1Q96BP2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CHCHD1Q96BP2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.53■□□□□ 0.08
CHCHD1Q96BP2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHCHD1Q96BP2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHCHD1Q96BP2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.53■□□□□ 0.08
CHCHD1Q96BP2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
CHCHD1Q96BP2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC15.53■□□□□ 0.08
CHCHD1Q96BP2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC15.53■□□□□ 0.08
CHCHD1Q96BP2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHCHD1Q96BP2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CHCHD1Q96BP2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHCHD1Q96BP2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHCHD1Q96BP2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.53■□□□□ 0.08
CHCHD1Q96BP2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHCHD1Q96BP2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.53■□□□□ 0.08
CHCHD1Q96BP2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHCHD1Q96BP2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.53■□□□□ 0.08
CHCHD1Q96BP2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHCHD1Q96BP2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHCHD1Q96BP2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CHCHD1Q96BP2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHCHD1Q96BP2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
CHCHD1Q96BP2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHCHD1Q96BP2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHCHD1Q96BP2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.52■□□□□ 0.08
CHCHD1Q96BP2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.52■□□□□ 0.08
CHCHD1Q96BP2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.52■□□□□ 0.08
CHCHD1Q96BP2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.52■□□□□ 0.08
CHCHD1Q96BP2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHCHD1Q96BP2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHCHD1Q96BP2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHCHD1Q96BP2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHCHD1Q96BP2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CHCHD1Q96BP2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHCHD1Q96BP2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.52■□□□□ 0.07
CHCHD1Q96BP2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHCHD1Q96BP2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHCHD1Q96BP2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CHCHD1Q96BP2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.52■□□□□ 0.07
CHCHD1Q96BP2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.52■□□□□ 0.07
CHCHD1Q96BP2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.52■□□□□ 0.07
CHCHD1Q96BP2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHCHD1Q96BP2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
CHCHD1Q96BP2 AL049796.1-201ENST00000565336 1766 ntBASIC15.52■□□□□ 0.07
CHCHD1Q96BP2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHCHD1Q96BP2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CHCHD1Q96BP2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CHCHD1Q96BP2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHCHD1Q96BP2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHCHD1Q96BP2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC15.51■□□□□ 0.07
CHCHD1Q96BP2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHCHD1Q96BP2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CHCHD1Q96BP2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CHCHD1Q96BP2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHCHD1Q96BP2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
CHCHD1Q96BP2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHCHD1Q96BP2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHCHD1Q96BP2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms