Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim60Q8VI40 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim60Q8VI40 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim60Q8VI40 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim60Q8VI40 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim60Q8VI40 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim60Q8VI40 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim60Q8VI40 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim60Q8VI40 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
Trim60Q8VI40 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim60Q8VI40 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim60Q8VI40 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim60Q8VI40 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim60Q8VI40 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim60Q8VI40 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim60Q8VI40 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim60Q8VI40 Gm11421-201ENSMUST00000122124 294 ntBASIC19.44■□□□□ 0.7
Trim60Q8VI40 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim60Q8VI40 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim60Q8VI40 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim60Q8VI40 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.44■□□□□ 0.7
Trim60Q8VI40 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim60Q8VI40 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim60Q8VI40 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trim60Q8VI40 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim60Q8VI40 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trim60Q8VI40 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim60Q8VI40 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim60Q8VI40 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.43■□□□□ 0.7
Trim60Q8VI40 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim60Q8VI40 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Trim60Q8VI40 Gm12251-201ENSMUST00000117893 792 ntBASIC19.43■□□□□ 0.7
Trim60Q8VI40 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim60Q8VI40 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
Trim60Q8VI40 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim60Q8VI40 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim60Q8VI40 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim60Q8VI40 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim60Q8VI40 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trim60Q8VI40 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim60Q8VI40 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim60Q8VI40 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim60Q8VI40 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim60Q8VI40 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim60Q8VI40 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trim60Q8VI40 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim60Q8VI40 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim60Q8VI40 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim60Q8VI40 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim60Q8VI40 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim60Q8VI40 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim60Q8VI40 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.42■□□□□ 0.7
Trim60Q8VI40 Gm13241-201ENSMUST00000094493 780 ntBASIC19.42■□□□□ 0.7
Trim60Q8VI40 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim60Q8VI40 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim60Q8VI40 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim60Q8VI40 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trim60Q8VI40 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim60Q8VI40 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim60Q8VI40 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim60Q8VI40 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trim60Q8VI40 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim60Q8VI40 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim60Q8VI40 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trim60Q8VI40 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Trim60Q8VI40 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim60Q8VI40 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim60Q8VI40 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim60Q8VI40 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim60Q8VI40 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.41■□□□□ 0.7
Trim60Q8VI40 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim60Q8VI40 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim60Q8VI40 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim60Q8VI40 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trim60Q8VI40 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim60Q8VI40 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim60Q8VI40 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim60Q8VI40 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim60Q8VI40 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim60Q8VI40 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim60Q8VI40 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim60Q8VI40 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim60Q8VI40 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.4■□□□□ 0.7
Trim60Q8VI40 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim60Q8VI40 Smad6-203ENSMUST00000179458 273 ntBASIC19.4■□□□□ 0.7
Trim60Q8VI40 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim60Q8VI40 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim60Q8VI40 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim60Q8VI40 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim60Q8VI40 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Trim60Q8VI40 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.39■□□□□ 0.69
Trim60Q8VI40 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim60Q8VI40 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Trim60Q8VI40 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim60Q8VI40 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim60Q8VI40 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim60Q8VI40 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim60Q8VI40 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim60Q8VI40 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim60Q8VI40 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms