Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINC01555Q8NAE3 AC004854.2-201ENST00000608450 1441 ntBASIC20.61■□□□□ 0.89
LINC01555Q8NAE3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.61■□□□□ 0.89
LINC01555Q8NAE3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.61■□□□□ 0.89
LINC01555Q8NAE3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.61■□□□□ 0.89
LINC01555Q8NAE3 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.61■□□□□ 0.89
LINC01555Q8NAE3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.61■□□□□ 0.89
LINC01555Q8NAE3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.61■□□□□ 0.89
LINC01555Q8NAE3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.61■□□□□ 0.89
LINC01555Q8NAE3 NTF6G-201ENST00000591094 616 ntBASIC20.61■□□□□ 0.89
LINC01555Q8NAE3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LINC01555Q8NAE3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
LINC01555Q8NAE3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINC01555Q8NAE3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LINC01555Q8NAE3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.61■□□□□ 0.89
LINC01555Q8NAE3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
LINC01555Q8NAE3 AP004607.4-201ENST00000530158 1459 ntBASIC20.61■□□□□ 0.89
LINC01555Q8NAE3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINC01555Q8NAE3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 KRT87P-202ENST00000534226 1464 ntBASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LINC01555Q8NAE3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.59■□□□□ 0.89
LINC01555Q8NAE3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.58■□□□□ 0.89
LINC01555Q8NAE3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.58■□□□□ 0.89
LINC01555Q8NAE3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LINC01555Q8NAE3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
LINC01555Q8NAE3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC01555Q8NAE3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LINC01555Q8NAE3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LINC01555Q8NAE3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.58■□□□□ 0.89
LINC01555Q8NAE3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.58■□□□□ 0.89
LINC01555Q8NAE3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.58■□□□□ 0.89
LINC01555Q8NAE3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
LINC01555Q8NAE3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LINC01555Q8NAE3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC01555Q8NAE3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC01555Q8NAE3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC01555Q8NAE3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LINC01555Q8NAE3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.57■□□□□ 0.88
LINC01555Q8NAE3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LINC01555Q8NAE3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LINC01555Q8NAE3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC01555Q8NAE3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LINC01555Q8NAE3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC01555Q8NAE3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LINC01555Q8NAE3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LINC01555Q8NAE3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms