Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.16■□□□□ 0.34
Ebf4Q8K4J2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ebf4Q8K4J2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf4Q8K4J2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Ebf4Q8K4J2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf4Q8K4J2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf4Q8K4J2 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.13■□□□□ 0.33
Ebf4Q8K4J2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf4Q8K4J2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf4Q8K4J2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf4Q8K4J2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ebf4Q8K4J2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf4Q8K4J2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf4Q8K4J2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.13■□□□□ 0.33
Ebf4Q8K4J2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf4Q8K4J2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf4Q8K4J2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf4Q8K4J2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf4Q8K4J2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.13■□□□□ 0.33
Ebf4Q8K4J2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.12■□□□□ 0.33
Ebf4Q8K4J2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf4Q8K4J2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.12■□□□□ 0.33
Ebf4Q8K4J2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.12■□□□□ 0.33
Ebf4Q8K4J2 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.12■□□□□ 0.33
Ebf4Q8K4J2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.12■□□□□ 0.33
Ebf4Q8K4J2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf4Q8K4J2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf4Q8K4J2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf4Q8K4J2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf4Q8K4J2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf4Q8K4J2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf4Q8K4J2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf4Q8K4J2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf4Q8K4J2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf4Q8K4J2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf4Q8K4J2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ebf4Q8K4J2 Gm13238-201ENSMUST00000117655 780 ntBASIC17.11■□□□□ 0.33
Ebf4Q8K4J2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ebf4Q8K4J2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf4Q8K4J2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.11■□□□□ 0.33
Ebf4Q8K4J2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf4Q8K4J2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf4Q8K4J2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ebf4Q8K4J2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf4Q8K4J2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf4Q8K4J2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf4Q8K4J2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf4Q8K4J2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.1■□□□□ 0.33
Ebf4Q8K4J2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.1■□□□□ 0.33
Ebf4Q8K4J2 Etf1-202ENSMUST00000180351 108 ntBASIC17.1■□□□□ 0.33
Ebf4Q8K4J2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf4Q8K4J2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf4Q8K4J2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf4Q8K4J2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf4Q8K4J2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.1■□□□□ 0.33
Ebf4Q8K4J2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf4Q8K4J2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf4Q8K4J2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ebf4Q8K4J2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms