Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trappc6aQ78XR0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trappc6aQ78XR0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trappc6aQ78XR0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.66■□□□□ 0.58
Trappc6aQ78XR0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trappc6aQ78XR0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.66■□□□□ 0.58
Trappc6aQ78XR0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.66■□□□□ 0.58
Trappc6aQ78XR0 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.66■□□□□ 0.58
Trappc6aQ78XR0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.66■□□□□ 0.58
Trappc6aQ78XR0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trappc6aQ78XR0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trappc6aQ78XR0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trappc6aQ78XR0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trappc6aQ78XR0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trappc6aQ78XR0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trappc6aQ78XR0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trappc6aQ78XR0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trappc6aQ78XR0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trappc6aQ78XR0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trappc6aQ78XR0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trappc6aQ78XR0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trappc6aQ78XR0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trappc6aQ78XR0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trappc6aQ78XR0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trappc6aQ78XR0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trappc6aQ78XR0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.65■□□□□ 0.58
Trappc6aQ78XR0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trappc6aQ78XR0 Dio3-201ENSMUST00000097228 1449 ntBASIC18.65■□□□□ 0.58
Trappc6aQ78XR0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trappc6aQ78XR0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.64■□□□□ 0.58
Trappc6aQ78XR0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trappc6aQ78XR0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trappc6aQ78XR0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trappc6aQ78XR0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trappc6aQ78XR0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trappc6aQ78XR0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Trappc6aQ78XR0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trappc6aQ78XR0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trappc6aQ78XR0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trappc6aQ78XR0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trappc6aQ78XR0 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.63■□□□□ 0.57
Trappc6aQ78XR0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trappc6aQ78XR0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trappc6aQ78XR0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trappc6aQ78XR0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trappc6aQ78XR0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trappc6aQ78XR0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trappc6aQ78XR0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.63■□□□□ 0.57
Trappc6aQ78XR0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trappc6aQ78XR0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trappc6aQ78XR0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trappc6aQ78XR0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trappc6aQ78XR0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trappc6aQ78XR0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.62■□□□□ 0.57
Trappc6aQ78XR0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trappc6aQ78XR0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trappc6aQ78XR0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trappc6aQ78XR0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trappc6aQ78XR0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trappc6aQ78XR0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.62■□□□□ 0.57
Trappc6aQ78XR0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.62■□□□□ 0.57
Trappc6aQ78XR0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trappc6aQ78XR0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trappc6aQ78XR0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trappc6aQ78XR0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trappc6aQ78XR0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Trappc6aQ78XR0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.61■□□□□ 0.57
Trappc6aQ78XR0 Gm44549-201ENSMUST00000208351 577 ntBASIC18.61■□□□□ 0.57
Trappc6aQ78XR0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trappc6aQ78XR0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trappc6aQ78XR0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trappc6aQ78XR0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trappc6aQ78XR0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trappc6aQ78XR0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trappc6aQ78XR0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.6■□□□□ 0.57
Trappc6aQ78XR0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.6■□□□□ 0.57
Trappc6aQ78XR0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.6■□□□□ 0.57
Trappc6aQ78XR0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trappc6aQ78XR0 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.6■□□□□ 0.57
Trappc6aQ78XR0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trappc6aQ78XR0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trappc6aQ78XR0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trappc6aQ78XR0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trappc6aQ78XR0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.6■□□□□ 0.57
Trappc6aQ78XR0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trappc6aQ78XR0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trappc6aQ78XR0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trappc6aQ78XR0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.59■□□□□ 0.57
Trappc6aQ78XR0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trappc6aQ78XR0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.59■□□□□ 0.57
Trappc6aQ78XR0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trappc6aQ78XR0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trappc6aQ78XR0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trappc6aQ78XR0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trappc6aQ78XR0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trappc6aQ78XR0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.58■□□□□ 0.57
Trappc6aQ78XR0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trappc6aQ78XR0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trappc6aQ78XR0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trappc6aQ78XR0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms