Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scube3Q66PY1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scube3Q66PY1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scube3Q66PY1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scube3Q66PY1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.74■□□□□ 0.75
Scube3Q66PY1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scube3Q66PY1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scube3Q66PY1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scube3Q66PY1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scube3Q66PY1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scube3Q66PY1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scube3Q66PY1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scube3Q66PY1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scube3Q66PY1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scube3Q66PY1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scube3Q66PY1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scube3Q66PY1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.72■□□□□ 0.75
Scube3Q66PY1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Scube3Q66PY1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Scube3Q66PY1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Scube3Q66PY1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.72■□□□□ 0.75
Scube3Q66PY1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scube3Q66PY1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scube3Q66PY1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scube3Q66PY1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scube3Q66PY1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Scube3Q66PY1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scube3Q66PY1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Scube3Q66PY1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scube3Q66PY1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scube3Q66PY1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scube3Q66PY1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scube3Q66PY1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scube3Q66PY1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Scube3Q66PY1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scube3Q66PY1 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.71■□□□□ 0.75
Scube3Q66PY1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scube3Q66PY1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scube3Q66PY1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scube3Q66PY1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scube3Q66PY1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.7■□□□□ 0.74
Scube3Q66PY1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scube3Q66PY1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scube3Q66PY1 Gm6365-201ENSMUST00000054711 744 ntBASIC19.7■□□□□ 0.74
Scube3Q66PY1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scube3Q66PY1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scube3Q66PY1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scube3Q66PY1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scube3Q66PY1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scube3Q66PY1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scube3Q66PY1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scube3Q66PY1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scube3Q66PY1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scube3Q66PY1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scube3Q66PY1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scube3Q66PY1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.69■□□□□ 0.74
Scube3Q66PY1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.69■□□□□ 0.74
Scube3Q66PY1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.69■□□□□ 0.74
Scube3Q66PY1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.69■□□□□ 0.74
Scube3Q66PY1 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.69■□□□□ 0.74
Scube3Q66PY1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scube3Q66PY1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scube3Q66PY1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Scube3Q66PY1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scube3Q66PY1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scube3Q66PY1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scube3Q66PY1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scube3Q66PY1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scube3Q66PY1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scube3Q66PY1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.68■□□□□ 0.74
Scube3Q66PY1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.68■□□□□ 0.74
Scube3Q66PY1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Scube3Q66PY1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scube3Q66PY1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Scube3Q66PY1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scube3Q66PY1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scube3Q66PY1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scube3Q66PY1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scube3Q66PY1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 134.5 ms