Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
VMA21Q3ZAQ7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
VMA21Q3ZAQ7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VMA21Q3ZAQ7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VMA21Q3ZAQ7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VMA21Q3ZAQ7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VMA21Q3ZAQ7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
VMA21Q3ZAQ7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.21■□□□□ 0.35
VMA21Q3ZAQ7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VMA21Q3ZAQ7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VMA21Q3ZAQ7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.21■□□□□ 0.35
VMA21Q3ZAQ7 AC024257.2-201ENST00000549699 147 ntBASIC17.21■□□□□ 0.35
VMA21Q3ZAQ7 AC233992.3-201ENST00000607491 485 ntBASIC17.21■□□□□ 0.35
VMA21Q3ZAQ7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VMA21Q3ZAQ7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
VMA21Q3ZAQ7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
VMA21Q3ZAQ7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
VMA21Q3ZAQ7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
VMA21Q3ZAQ7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 AC126544.1-201ENST00000580842 1059 ntBASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 AP004607.7-201ENST00000527152 1677 ntBASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
VMA21Q3ZAQ7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
VMA21Q3ZAQ7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VMA21Q3ZAQ7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VMA21Q3ZAQ7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.18■□□□□ 0.34
VMA21Q3ZAQ7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
VMA21Q3ZAQ7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VMA21Q3ZAQ7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VMA21Q3ZAQ7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.18■□□□□ 0.34
VMA21Q3ZAQ7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.18■□□□□ 0.34
VMA21Q3ZAQ7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.18■□□□□ 0.34
VMA21Q3ZAQ7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VMA21Q3ZAQ7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VMA21Q3ZAQ7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.18■□□□□ 0.34
VMA21Q3ZAQ7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
VMA21Q3ZAQ7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.18■□□□□ 0.34
VMA21Q3ZAQ7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VMA21Q3ZAQ7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VMA21Q3ZAQ7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
VMA21Q3ZAQ7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.18■□□□□ 0.34
VMA21Q3ZAQ7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
VMA21Q3ZAQ7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VMA21Q3ZAQ7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
VMA21Q3ZAQ7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VMA21Q3ZAQ7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VMA21Q3ZAQ7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VMA21Q3ZAQ7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.17■□□□□ 0.34
VMA21Q3ZAQ7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.17■□□□□ 0.34
VMA21Q3ZAQ7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VMA21Q3ZAQ7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.17■□□□□ 0.34
VMA21Q3ZAQ7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.17■□□□□ 0.34
VMA21Q3ZAQ7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.17■□□□□ 0.34
VMA21Q3ZAQ7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VMA21Q3ZAQ7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
VMA21Q3ZAQ7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VMA21Q3ZAQ7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.17■□□□□ 0.34
VMA21Q3ZAQ7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VMA21Q3ZAQ7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.17■□□□□ 0.34
VMA21Q3ZAQ7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VMA21Q3ZAQ7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.16■□□□□ 0.34
VMA21Q3ZAQ7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.16■□□□□ 0.34
VMA21Q3ZAQ7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.16■□□□□ 0.34
VMA21Q3ZAQ7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VMA21Q3ZAQ7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.16■□□□□ 0.34
VMA21Q3ZAQ7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VMA21Q3ZAQ7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms