Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim63Q38HM4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim63Q38HM4 BC021767-201ENSMUST00000126387 1716 ntBASIC15.63■□□□□ 0.09
Trim63Q38HM4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim63Q38HM4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim63Q38HM4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim63Q38HM4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.62■□□□□ 0.09
Trim63Q38HM4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim63Q38HM4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim63Q38HM4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.62■□□□□ 0.09
Trim63Q38HM4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim63Q38HM4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim63Q38HM4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim63Q38HM4 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.62■□□□□ 0.09
Trim63Q38HM4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim63Q38HM4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim63Q38HM4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim63Q38HM4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim63Q38HM4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim63Q38HM4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trim63Q38HM4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim63Q38HM4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim63Q38HM4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trim63Q38HM4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim63Q38HM4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim63Q38HM4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim63Q38HM4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim63Q38HM4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim63Q38HM4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim63Q38HM4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim63Q38HM4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim63Q38HM4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trim63Q38HM4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim63Q38HM4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim63Q38HM4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Trim63Q38HM4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trim63Q38HM4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim63Q38HM4 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim63Q38HM4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim63Q38HM4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim63Q38HM4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim63Q38HM4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim63Q38HM4 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.6■□□□□ 0.09
Trim63Q38HM4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim63Q38HM4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim63Q38HM4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim63Q38HM4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trim63Q38HM4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim63Q38HM4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim63Q38HM4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim63Q38HM4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim63Q38HM4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim63Q38HM4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim63Q38HM4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim63Q38HM4 Tdp2-203ENSMUST00000223804 1136 ntBASIC15.59■□□□□ 0.09
Trim63Q38HM4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trim63Q38HM4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim63Q38HM4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim63Q38HM4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim63Q38HM4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trim63Q38HM4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim63Q38HM4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim63Q38HM4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim63Q38HM4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim63Q38HM4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim63Q38HM4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim63Q38HM4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim63Q38HM4 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.58■□□□□ 0.08
Trim63Q38HM4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
Trim63Q38HM4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim63Q38HM4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim63Q38HM4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim63Q38HM4 Terc-201ENSMUST00000082862 423 ntBASIC15.58■□□□□ 0.08
Trim63Q38HM4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim63Q38HM4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim63Q38HM4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim63Q38HM4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim63Q38HM4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim63Q38HM4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim63Q38HM4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim63Q38HM4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim63Q38HM4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim63Q38HM4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trim63Q38HM4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim63Q38HM4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim63Q38HM4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim63Q38HM4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim63Q38HM4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim63Q38HM4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim63Q38HM4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trim63Q38HM4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim63Q38HM4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Trim63Q38HM4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim63Q38HM4 Gm13889-201ENSMUST00000099689 1386 ntBASIC15.57■□□□□ 0.08
Trim63Q38HM4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim63Q38HM4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim63Q38HM4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim63Q38HM4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim63Q38HM4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim63Q38HM4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms