Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cacna1aP97445 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Cacna1aP97445 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cacna1aP97445 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.39■□□□□ 0.37
Cacna1aP97445 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cacna1aP97445 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cacna1aP97445 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Cacna1aP97445 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1aP97445 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1aP97445 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cacna1aP97445 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1aP97445 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Cacna1aP97445 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1aP97445 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cacna1aP97445 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cacna1aP97445 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1aP97445 Gm6433-201ENSMUST00000118634 875 ntBASIC17.38■□□□□ 0.37
Cacna1aP97445 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.38■□□□□ 0.37
Cacna1aP97445 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1aP97445 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cacna1aP97445 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1aP97445 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.37■□□□□ 0.37
Cacna1aP97445 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1aP97445 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1aP97445 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1aP97445 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1aP97445 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cacna1aP97445 Gm2399-201ENSMUST00000104944 225 ntBASIC17.37■□□□□ 0.37
Cacna1aP97445 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.37■□□□□ 0.37
Cacna1aP97445 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1aP97445 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.37■□□□□ 0.37
Cacna1aP97445 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1aP97445 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1aP97445 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1aP97445 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.36■□□□□ 0.37
Cacna1aP97445 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1aP97445 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Cacna1aP97445 Gm43799-201ENSMUST00000201845 579 ntBASIC17.36■□□□□ 0.37
Cacna1aP97445 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1aP97445 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Cacna1aP97445 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1aP97445 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1aP97445 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1aP97445 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1aP97445 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1aP97445 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1aP97445 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.36■□□□□ 0.37
Cacna1aP97445 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.36■□□□□ 0.37
Cacna1aP97445 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1aP97445 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.35■□□□□ 0.37
Cacna1aP97445 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1aP97445 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.35■□□□□ 0.37
Cacna1aP97445 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1aP97445 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1aP97445 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.35■□□□□ 0.37
Cacna1aP97445 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.35■□□□□ 0.37
Cacna1aP97445 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1aP97445 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.35■□□□□ 0.37
Cacna1aP97445 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cacna1aP97445 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1aP97445 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cacna1aP97445 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1aP97445 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1aP97445 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1aP97445 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1aP97445 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1aP97445 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1aP97445 Gm15378-201ENSMUST00000121894 207 ntBASIC17.34■□□□□ 0.37
Cacna1aP97445 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1aP97445 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1aP97445 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1aP97445 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1aP97445 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1aP97445 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Cacna1aP97445 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna1aP97445 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna1aP97445 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna1aP97445 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
Cacna1aP97445 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna1aP97445 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna1aP97445 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1aP97445 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1aP97445 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1aP97445 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1aP97445 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cacna1aP97445 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1aP97445 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cacna1aP97445 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.33■□□□□ 0.36
Cacna1aP97445 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cacna1aP97445 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.32■□□□□ 0.36
Cacna1aP97445 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1aP97445 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1aP97445 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1aP97445 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.32■□□□□ 0.36
Cacna1aP97445 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1aP97445 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.32■□□□□ 0.36
Cacna1aP97445 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.32■□□□□ 0.36
Cacna1aP97445 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1aP97445 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1aP97445 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms