Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.98■□□□□ 0.63
CSNK1A1P48729 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.98■□□□□ 0.63
CSNK1A1P48729 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1A1P48729 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1A1P48729 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CSNK1A1P48729 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1A1P48729 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CSNK1A1P48729 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.98■□□□□ 0.63
CSNK1A1P48729 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1A1P48729 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1A1P48729 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1A1P48729 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.98■□□□□ 0.63
CSNK1A1P48729 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.98■□□□□ 0.63
CSNK1A1P48729 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.98■□□□□ 0.63
CSNK1A1P48729 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1A1P48729 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.98■□□□□ 0.63
CSNK1A1P48729 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1A1P48729 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.98■□□□□ 0.63
CSNK1A1P48729 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1A1P48729 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1A1P48729 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1A1P48729 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1A1P48729 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.97■□□□□ 0.63
CSNK1A1P48729 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.97■□□□□ 0.63
CSNK1A1P48729 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.97■□□□□ 0.63
CSNK1A1P48729 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.97■□□□□ 0.63
CSNK1A1P48729 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.97■□□□□ 0.63
CSNK1A1P48729 AC010542.4-201ENST00000563151 1910 ntBASIC18.97■□□□□ 0.63
CSNK1A1P48729 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CSNK1A1P48729 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CSNK1A1P48729 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1A1P48729 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1A1P48729 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1A1P48729 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1A1P48729 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1A1P48729 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1A1P48729 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1A1P48729 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1A1P48729 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1A1P48729 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1A1P48729 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1A1P48729 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
CSNK1A1P48729 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1A1P48729 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CSNK1A1P48729 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.96■□□□□ 0.63
CSNK1A1P48729 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1A1P48729 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1A1P48729 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1A1P48729 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1A1P48729 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
CSNK1A1P48729 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1A1P48729 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.96■□□□□ 0.63
CSNK1A1P48729 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1A1P48729 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1A1P48729 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1A1P48729 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.95■□□□□ 0.62
CSNK1A1P48729 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1A1P48729 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.95■□□□□ 0.62
CSNK1A1P48729 AC009237.3-201ENST00000393279 1427 ntBASIC18.95■□□□□ 0.62
CSNK1A1P48729 IRS3P-201ENST00000223076 1006 ntBASIC18.95■□□□□ 0.62
CSNK1A1P48729 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.95■□□□□ 0.62
CSNK1A1P48729 AC012414.1-201ENST00000556676 535 ntBASIC18.95■□□□□ 0.62
CSNK1A1P48729 AL354811.1-201ENST00000610286 706 ntBASIC18.95■□□□□ 0.62
CSNK1A1P48729 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CSNK1A1P48729 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CSNK1A1P48729 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1A1P48729 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1A1P48729 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1A1P48729 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1A1P48729 AP006587.3-201ENST00000525742 1516 ntBASIC18.95■□□□□ 0.62
CSNK1A1P48729 BX005040.4-201ENST00000637145 1518 ntBASIC18.95■□□□□ 0.62
CSNK1A1P48729 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1A1P48729 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1A1P48729 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1A1P48729 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1A1P48729 AC026471.6-201ENST00000622954 1905 ntBASIC18.94■□□□□ 0.62
CSNK1A1P48729 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CSNK1A1P48729 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.94■□□□□ 0.62
CSNK1A1P48729 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
CSNK1A1P48729 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1A1P48729 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1A1P48729 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CSNK1A1P48729 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.94■□□□□ 0.62
CSNK1A1P48729 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1A1P48729 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.94■□□□□ 0.62
CSNK1A1P48729 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CSNK1A1P48729 AC104564.3-201ENST00000582367 638 ntBASIC18.94■□□□□ 0.62
CSNK1A1P48729 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.94■□□□□ 0.62
CSNK1A1P48729 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.94■□□□□ 0.62
CSNK1A1P48729 AL358852.1-201ENST00000623174 1268 ntBASIC18.94■□□□□ 0.62
CSNK1A1P48729 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.94■□□□□ 0.62
CSNK1A1P48729 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1A1P48729 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.94■□□□□ 0.62
CSNK1A1P48729 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1A1P48729 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1A1P48729 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.94■□□□□ 0.62
CSNK1A1P48729 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSNK1A1P48729 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.93■□□□□ 0.62
CSNK1A1P48729 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CSNK1A1P48729 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms