Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 SSO2YMR183C 888 nt3.23□□□□□ -1.89
TY1B-JR1P47098 CTF4YPR135W 2784 nt3.23□□□□□ -1.89
TY1B-JR1P47098 YJL052C-AYJL052C-A 120 nt3.23□□□□□ -1.89
TY1B-JR1P47098 RTT107YHR154W 3213 nt3.22□□□□□ -1.89
TY1B-JR1P47098 RPL17BYJL177W 555 nt3.22□□□□□ -1.89
TY1B-JR1P47098 SWC7YLR385C 399 nt3.22□□□□□ -1.89
TY1B-JR1P47098 snR83snR83 306 nt3.21□□□□□ -1.9
TY1B-JR1P47098 CIR1YGR207C 786 nt3.21□□□□□ -1.9
TY1B-JR1P47098 APN2YBL019W 1563 nt3.21□□□□□ -1.9
TY1B-JR1P47098 RPO21YDL140C 5202 nt3.21□□□□□ -1.9
TY1B-JR1P47098 YSP2YDR326C 4317 nt3.2□□□□□ -1.9
TY1B-JR1P47098 STE14YDR410C 720 nt3.2□□□□□ -1.9
TY1B-JR1P47098 ISC10YER180C 804 nt3.2□□□□□ -1.9
TY1B-JR1P47098 YKL131WYKL131W 522 nt3.2□□□□□ -1.9
TY1B-JR1P47098 KHA1YJL094C 2622 nt3.2□□□□□ -1.9
TY1B-JR1P47098 BNA4YBL098W 1383 nt3.2□□□□□ -1.9
TY1B-JR1P47098 EMI1YDR512C 564 nt3.2□□□□□ -1.9
TY1B-JR1P47098 RSM19YNR037C 276 nt3.2□□□□□ -1.9
TY1B-JR1P47098 RCY1YJL204C 2523 nt3.2□□□□□ -1.9
TY1B-JR1P47098 YDR261C-DYDR261C-D 4815 nt3.19□□□□□ -1.9
TY1B-JR1P47098 TOR1YJR066W 7413 nt3.19□□□□□ -1.9
TY1B-JR1P47098 YBR259WYBR259W 2067 nt3.19□□□□□ -1.9
TY1B-JR1P47098 PRP8YHR165C 7242 nt3.19□□□□□ -1.9
TY1B-JR1P47098 YLR154W-EYLR154W-E 204 nt3.19□□□□□ -1.9
TY1B-JR1P47098 PFY1YOR122C 381 nt3.19□□□□□ -1.9
TY1B-JR1P47098 KAP95YLR347C 2586 nt3.18□□□□□ -1.9
TY1B-JR1P47098 YGL159WYGL159W 1113 nt3.18□□□□□ -1.9
TY1B-JR1P47098 WHI4YDL224C 1950 nt3.18□□□□□ -1.9
TY1B-JR1P47098 PEP7YDR323C 1548 nt3.18□□□□□ -1.9
TY1B-JR1P47098 BUD2YKL092C 3315 nt3.17□□□□□ -1.9
TY1B-JR1P47098 SBE22YHR103W 2559 nt3.17□□□□□ -1.9
TY1B-JR1P47098 KAR5YMR065W 1515 nt3.17□□□□□ -1.9
TY1B-JR1P47098 RFC5YBR087W 1065 nt3.17□□□□□ -1.9
TY1B-JR1P47098 ECM5YMR176W 4236 nt3.17□□□□□ -1.9
TY1B-JR1P47098 ELP3YPL086C 1674 nt3.17□□□□□ -1.9
TY1B-JR1P47098 TAF6YGL112C 1551 nt3.16□□□□□ -1.9
TY1B-JR1P47098 PML39YML107C 1005 nt3.16□□□□□ -1.9
TY1B-JR1P47098 FYV12YOR183W 390 nt3.16□□□□□ -1.9
TY1B-JR1P47098 SQS1YNL224C 2304 nt3.16□□□□□ -1.9
TY1B-JR1P47098 YGL014C-AYGL014C-A 162 nt3.15□□□□□ -1.9
TY1B-JR1P47098 YBR139WYBR139W 1527 nt3.15□□□□□ -1.9
TY1B-JR1P47098 VPS27YNR006W 1869 nt3.15□□□□□ -1.91
TY1B-JR1P47098 ARD1YHR013C 717 nt3.15□□□□□ -1.91
TY1B-JR1P47098 YMR030W-AYMR030W-A 291 nt3.15□□□□□ -1.91
TY1B-JR1P47098 RPL25YOL127W 429 nt3.15□□□□□ -1.91
TY1B-JR1P47098 BPT1YLL015W 4680 nt3.14□□□□□ -1.91
TY1B-JR1P47098 MYO4YAL029C 4416 nt3.14□□□□□ -1.91
TY1B-JR1P47098 SAT4YCR008W 1812 nt3.14□□□□□ -1.91
TY1B-JR1P47098 SKM1YOL113W 1968 nt3.14□□□□□ -1.91
TY1B-JR1P47098 PDS1YDR113C 1122 nt3.14□□□□□ -1.91
TY1B-JR1P47098 RPS7AYOR096W 573 nt3.14□□□□□ -1.91
TY1B-JR1P47098 YER133W-AYER133W-A 342 nt3.13□□□□□ -1.91
TY1B-JR1P47098 YLR363W-AYLR363W-A 258 nt3.13□□□□□ -1.91
TY1B-JR1P47098 YBR103C-AYBR103C-A 144 nt3.13□□□□□ -1.91
TY1B-JR1P47098 SEC6YIL068C 2418 nt3.13□□□□□ -1.91
TY1B-JR1P47098 YAR009CYAR009C 3591 nt3.13□□□□□ -1.91
TY1B-JR1P47098 NVJ1YHR195W 966 nt3.12□□□□□ -1.91
TY1B-JR1P47098 DYN2YDR424C 279 nt3.12□□□□□ -1.91
TY1B-JR1P47098 ATG19YOL082W 1248 nt3.12□□□□□ -1.91
TY1B-JR1P47098 HST2YPL015C 1074 nt3.12□□□□□ -1.91
TY1B-JR1P47098 ALG14YBR070C 714 nt3.12□□□□□ -1.91
TY1B-JR1P47098 ADR1YDR216W 3972 nt3.12□□□□□ -1.91
TY1B-JR1P47098 YHR177WYHR177W 1362 nt3.12□□□□□ -1.91
TY1B-JR1P47098 TRM3YDL112W 4311 nt3.12□□□□□ -1.91
TY1B-JR1P47098 HRD1YOL013C 1656 nt3.12□□□□□ -1.91
TY1B-JR1P47098 HRD3YLR207W 2502 nt3.12□□□□□ -1.91
TY1B-JR1P47098 PUT2YHR037W 1728 nt3.11□□□□□ -1.91
TY1B-JR1P47098 FMP10YER182W 735 nt3.11□□□□□ -1.91
TY1B-JR1P47098 YHL045WYHL045W 348 nt3.11□□□□□ -1.91
TY1B-JR1P47098 YHR210CYHR210C 1026 nt3.11□□□□□ -1.91
TY1B-JR1P47098 YKT6YKL196C 603 nt3.11□□□□□ -1.91
TY1B-JR1P47098 AMS1YGL156W 3252 nt3.11□□□□□ -1.91
TY1B-JR1P47098 OAF3YKR064W 2592 nt3.1□□□□□ -1.91
TY1B-JR1P47098 SMA1YPL027W 738 nt3.1□□□□□ -1.91
TY1B-JR1P47098 IXR1YKL032C 1794 nt3.1□□□□□ -1.91
TY1B-JR1P47098 UBP6YFR010W 1500 nt3.1□□□□□ -1.91
TY1B-JR1P47098 FAS1YKL182W 6156 nt3.1□□□□□ -1.91
TY1B-JR1P47098 ARP7YPR034W 1434 nt3.09□□□□□ -1.91
TY1B-JR1P47098 NSA1YGL111W 1392 nt3.09□□□□□ -1.91
TY1B-JR1P47098 GIP1YBR045C 1920 nt3.09□□□□□ -1.92
TY1B-JR1P47098 YIL082W-AYIL082W-A 4497 nt3.09□□□□□ -1.92
TY1B-JR1P47098 MRP8YKL142W 660 nt3.08□□□□□ -1.92
TY1B-JR1P47098 RPS28BYLR264W 204 nt3.08□□□□□ -1.92
TY1B-JR1P47098 RRG8YPR116W 834 nt3.08□□□□□ -1.92
TY1B-JR1P47098 YDR149CYDR149C 708 nt3.07□□□□□ -1.92
TY1B-JR1P47098 THO1YER063W 657 nt3.07□□□□□ -1.92
TY1B-JR1P47098 YKL091CYKL091C 933 nt3.07□□□□□ -1.92
TY1B-JR1P47098 HUG1YML058W-A 207 nt3.07□□□□□ -1.92
TY1B-JR1P47098 DGR1YNL130C-A 147 nt3.07□□□□□ -1.92
TY1B-JR1P47098 YPR053CYPR053C 456 nt3.07□□□□□ -1.92
TY1B-JR1P47098 PCL8YPL219W 1479 nt3.07□□□□□ -1.92
TY1B-JR1P47098 COS111YBR203W 2775 nt3.07□□□□□ -1.92
TY1B-JR1P47098 SEF1YBL066C 3447 nt3.07□□□□□ -1.92
TY1B-JR1P47098 NUP192YJL039C 5052 nt3.07□□□□□ -1.92
TY1B-JR1P47098 ISM1YPL040C 3009 nt3.07□□□□□ -1.92
TY1B-JR1P47098 PDX1YGR193C 1233 nt3.07□□□□□ -1.92
TY1B-JR1P47098 RPL36AYMR194W 303 nt3.07□□□□□ -1.92
TY1B-JR1P47098 YPL088WYPL088W 1029 nt3.07□□□□□ -1.92
TY1B-JR1P47098 RNA14YMR061W 2034 nt3.07□□□□□ -1.92
TY1B-JR1P47098 BNI4YNL233W 2679 nt3.06□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 31.1 ms