Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 CDC27-206ENST00000528748 859 ntTSL 312.49□□□□□ -0.414e-9■■■■■ 27.7
U2AF2P26368 CDC27-204ENST00000527547 2579 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.724e-9■■■■■ 27.7
U2AF2P26368 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.864e-9■■■■■ 27.7
U2AF2P26368 CDC27-208ENST00000532575 765 ntTSL 38.84□□□□□ -0.994e-9■■■■■ 27.7
U2AF2P26368 CSPP1-207ENST00000521919 567 ntAPPRIS ALT2 TSL 48.05□□□□□ -1.124e-9■■■■■ 27.7
U2AF2P26368 CDC27-215ENST00000573550 583 ntTSL 35.25□□□□□ -1.574e-9■■■■■ 27.7
U2AF2P26368 CSPP1-204ENST00000519701 569 ntTSL 44.08□□□□□ -1.764e-9■■■■■ 27.7
U2AF2P26368 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.964e-9■■■■■ 27.7
U2AF2P26368 ENPP1-203ENST00000486853 732 ntTSL 233.03■■■□□ 2.884e-8■■■■■ 27.6
U2AF2P26368 MEF2A-209ENST00000558983 847 ntTSL 328.67■■■□□ 2.182e-6■■■■■ 27.6
U2AF2P26368 ITIH2-206ENST00000480387 573 ntTSL 39.58□□□□□ -0.882e-14■■■■■ 27.6
U2AF2P26368 ITIH2-203ENST00000429820 767 ntTSL 39.21□□□□□ -0.942e-14■■■■■ 27.6
U2AF2P26368 SYCP2L-204ENST00000474197 728 ntTSL 21.7□□□□□ -2.144e-7■■■■■ 27.6
U2AF2P26368 ACOX3-205ENST00000510365 2050 ntTSL 520.66■□□□□ 0.99e-7■■■■■ 27.6
U2AF2P26368 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.569e-7■■■■■ 27.6
U2AF2P26368 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.26■□□□□ 0.519e-7■■■■■ 27.6
U2AF2P26368 ACOX3-201ENST00000356406 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.069e-7■■■■■ 27.6
U2AF2P26368 ACOX3-204ENST00000508302 576 ntTSL 310.49□□□□□ -0.739e-7■■■■■ 27.6
U2AF2P26368 RNASET2-211ENST00000509073 433 ntTSL 28.49□□□□□ -1.053e-7■■■■■ 27.6
U2AF2P26368 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.46■■□□□ 1.031e-9■■■■■ 27.6
U2AF2P26368 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.64■□□□□ 0.411e-9■■■■■ 27.6
U2AF2P26368 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.41e-9■■■■■ 27.6
U2AF2P26368 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC16.59■□□□□ 0.251e-9■■■■■ 27.6
U2AF2P26368 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.25■□□□□ 0.191e-9■■■■■ 27.6
U2AF2P26368 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.171e-9■■■■■ 27.6
U2AF2P26368 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.87■□□□□ 0.131e-9■■■■■ 27.6
U2AF2P26368 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.87■□□□□ 0.131e-9■■■■■ 27.6
U2AF2P26368 ZCCHC17-203ENST00000479629 761 ntTSL 212.75□□□□□ -0.371e-9■■■■■ 27.6
U2AF2P26368 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC9.11□□□□□ -0.951e-9■■■■■ 27.6
U2AF2P26368 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.91□□□□□ -1.141e-9■■■■■ 27.6
U2AF2P26368 ERGIC2-202ENST00000546509 308 ntTSL 33.37□□□□□ -1.872e-21■■■■■ 27.6
U2AF2P26368 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.09■□□□□ 0.978e-7■■■■■ 27.6
U2AF2P26368 BMS1P4-203ENST00000580790 1913 ntTSL 1 (best) BASIC11.66□□□□□ -0.548e-7■■■■■ 27.6
U2AF2P26368 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC9.98□□□□□ -0.818e-7■■■■■ 27.6
U2AF2P26368 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.41■□□□□ 0.224e-10■■■■■ 27.6
U2AF2P26368 RIT1-203ENST00000461050 803 ntTSL 514.54□□□□□ -0.084e-10■■■■■ 27.6
U2AF2P26368 RIT1-202ENST00000368323 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.444e-10■■■■■ 27.6
U2AF2P26368 RIT1-204ENST00000462687 548 ntTSL 311.96□□□□□ -0.495e-10■■■■■ 27.6
U2AF2P26368 RIT1-201ENST00000368322 855 ntTSL 3 BASIC8.96□□□□□ -0.984e-10■■■■■ 27.6
U2AF2P26368 RIT1-206ENST00000609492 574 ntTSL 1 (best)8.14□□□□□ -1.114e-10■■■■■ 27.6
U2AF2P26368 STAG2-211ENST00000455404 2089 ntTSL 511.91□□□□□ -0.52e-9■■■■■ 27.5
U2AF2P26368 STAG2-218ENST00000483575 864 ntTSL 511.88□□□□□ -0.512e-9■■■■■ 27.5
U2AF2P26368 STAG2-216ENST00000471107 709 ntTSL 57.57□□□□□ -1.22e-9■■■■■ 27.5
U2AF2P26368 STAG2-214ENST00000466748 873 ntTSL 56.43□□□□□ -1.382e-9■■■■■ 27.5
U2AF2P26368 UGGT1-205ENST00000438277 3113 ntTSL 1 (best)15.3■□□□□ 0.049e-8■■■■■ 27.5
U2AF2P26368 PKN2-204ENST00000436111 632 ntTSL 32.62□□□□□ -1.996e-9■■■■■ 27.5
U2AF2P26368 PAXBP1-204ENST00000443785 2920 ntTSL 1 (best)22.33■■□□□ 1.166e-8■■■■■ 27.5
U2AF2P26368 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.556e-8■■■■■ 27.5
U2AF2P26368 TXNIP-203ENST00000488537 1509 ntTSL 58.03□□□□□ -1.121e-9■■■■■ 27.5
U2AF2P26368 DENND5A-212ENST00000530867 529 ntTSL 22.49□□□□□ -2.014e-17■■■■■ 27.5
U2AF2P26368 TNKS1BP1-205ENST00000530920 957 ntTSL 324.11■■□□□ 1.452e-9■■■■■ 27.5
U2AF2P26368 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.751e-8■■■■■ 27.5
U2AF2P26368 SHMT1-207ENST00000580002 1759 ntTSL 228.89■■■□□ 2.228e-8■■■■■ 27.5
U2AF2P26368 SHMT1-206ENST00000579558 1077 ntTSL 226.73■■□□□ 1.878e-8■■■■■ 27.5
U2AF2P26368 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.698e-8■■■■■ 27.5
U2AF2P26368 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.23■■□□□ 1.638e-8■■■■■ 27.5
U2AF2P26368 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC25.22■■□□□ 1.638e-8■■■■■ 27.5
U2AF2P26368 WSB1-216ENST00000584114 479 ntTSL 33.61□□□□□ -1.831e-9■■■■■ 27.5
U2AF2P26368 ARGLU1-204ENST00000472226 1336 ntTSL 26.25□□□□□ -1.416e-31■■■■■ 27.5
U2AF2P26368 FBXO11-206ENST00000465204 3158 ntTSL 26.36□□□□□ -1.391e-7■■■■■ 27.5
U2AF2P26368 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.07□□□□□ -1.921e-7■■■■■ 27.5
U2AF2P26368 FBXO11-205ENST00000434234 572 ntTSL 32.05□□□□□ -2.081e-7■■■■■ 27.5
U2AF2P26368 ERI1-208ENST00000522612 521 ntTSL 33.25□□□□□ -1.899e-9■■■■■ 27.5
U2AF2P26368 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC24.62■■□□□ 1.531e-7■■■■■ 27.5
U2AF2P26368 PMS1-208ENST00000421722 2285 ntTSL 27.18□□□□□ -1.261e-7■■■■■ 27.5
U2AF2P26368 PMS1-216ENST00000447734 570 ntTSL 53.33□□□□□ -1.881e-7■■■■■ 27.5
U2AF2P26368 PMS1-210ENST00000424307 2153 ntTSL 51.14□□□□□ -2.231e-7■■■■■ 27.5
U2AF2P26368 IST1-222ENST00000545388 630 ntTSL 212.18□□□□□ -0.464e-11■■■■■ 27.4
U2AF2P26368 IST1-211ENST00000537613 894 ntTSL 211.83□□□□□ -0.524e-11■■■■■ 27.4
U2AF2P26368 IST1-207ENST00000534994 674 ntTSL 511.52□□□□□ -0.574e-11■■■■■ 27.4
U2AF2P26368 IST1-214ENST00000538709 491 ntTSL 211.42□□□□□ -0.586e-16■■■■■ 27.4
U2AF2P26368 IST1-220ENST00000541918 908 ntTSL 59.8□□□□□ -0.844e-11■■■■■ 27.4
U2AF2P26368 IST1-210ENST00000537571 603 ntTSL 26.26□□□□□ -1.414e-11■■■■■ 27.4
U2AF2P26368 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.86□□□□□ -2.274e-11■■■■■ 27.4
U2AF2P26368 ASCC3-204ENST00000369162 8146 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.587e-7■■■■■ 27.4
U2AF2P26368 RAPGEF6-209ENST00000510071 3107 ntTSL 1 (best) BASIC13.48□□□□□ -0.253e-8■■■■■ 27.4
U2AF2P26368 SEC31A-230ENST00000510167 857 ntTSL 49.61□□□□□ -0.873e-20■■■■■ 27.4
U2AF2P26368 SEC31A-224ENST00000507828 1329 ntTSL 55.8□□□□□ -1.483e-20■■■■■ 27.4
U2AF2P26368 SEC31A-234ENST00000512664 710 ntTSL 32.77□□□□□ -1.973e-20■■■■■ 27.4
U2AF2P26368 MSH5-206ENST00000423982 2706 ntTSL 517.05■□□□□ 0.327e-8■■■■■ 27.4
U2AF2P26368 SETD5-227ENST00000492939 634 ntTSL 213.3□□□□□ -0.283e-12■■■■■ 27.4
U2AF2P26368 CUL4A-211ENST00000498562 790 ntTSL 328.53■■■□□ 2.162e-7■■■■■ 27.4
U2AF2P26368 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.394e-9■■■■■ 27.4
U2AF2P26368 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.334e-9■■■■■ 27.4
U2AF2P26368 ATXN2L-211ENST00000563314 4574 ntTSL 516.79■□□□□ 0.284e-9■■■■■ 27.4
U2AF2P26368 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.244e-9■■■■■ 27.4
U2AF2P26368 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.114e-9■■■■■ 27.4
U2AF2P26368 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.094e-9■■■■■ 27.4
U2AF2P26368 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.054e-9■■■■■ 27.4
U2AF2P26368 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.034e-9■■■■■ 27.4
U2AF2P26368 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.035e-10■■■■■ 27.4
U2AF2P26368 EXOSC3-203ENST00000465229 1625 ntTSL 219.33■□□□□ 0.695e-10■■■■■ 27.4
U2AF2P26368 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.08■□□□□ 0.645e-10■■■■■ 27.4
U2AF2P26368 EXOSC3-205ENST00000482614 462 ntTSL 517.11■□□□□ 0.335e-10■■■■■ 27.4
U2AF2P26368 EXOSC3-207ENST00000490516 773 ntTSL 215.06■□□□□ 05e-10■■■■■ 27.4
U2AF2P26368 EXOSC3-206ENST00000489414 535 ntTSL 48.44□□□□□ -1.065e-10■■■■■ 27.4
U2AF2P26368 SMC4-205ENST00000465563 747 ntTSL 22.03□□□□□ -2.083e-6■■■■■ 27.4
U2AF2P26368 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.67■□□□□ 0.93e-8■■■■■ 27.4
U2AF2P26368 CNST-204ENST00000483271 2767 ntTSL 219.09■□□□□ 0.653e-8■■■■■ 27.4
U2AF2P26368 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.443e-8■■■■■ 27.4
Retrieved 100 of 36,523 protein–RNA pairs in 456.9 ms