Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.64■□□□□ 0.58
UPK1BO75841 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UPK1BO75841 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1BO75841 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.64■□□□□ 0.57
UPK1BO75841 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
UPK1BO75841 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
UPK1BO75841 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1BO75841 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1BO75841 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1BO75841 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
UPK1BO75841 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1BO75841 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1BO75841 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1BO75841 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.64■□□□□ 0.57
UPK1BO75841 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1BO75841 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.64■□□□□ 0.57
UPK1BO75841 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
UPK1BO75841 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
UPK1BO75841 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1BO75841 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1BO75841 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
UPK1BO75841 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1BO75841 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.64■□□□□ 0.57
UPK1BO75841 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK1BO75841 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
UPK1BO75841 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1BO75841 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
UPK1BO75841 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1BO75841 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.63■□□□□ 0.57
UPK1BO75841 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.63■□□□□ 0.57
UPK1BO75841 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1BO75841 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.63■□□□□ 0.57
UPK1BO75841 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
UPK1BO75841 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
UPK1BO75841 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1BO75841 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1BO75841 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1BO75841 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1BO75841 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
UPK1BO75841 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK1BO75841 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1BO75841 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1BO75841 LETM1P2-201ENST00000597330 2178 ntBASIC18.62■□□□□ 0.57
UPK1BO75841 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.62■□□□□ 0.57
UPK1BO75841 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1BO75841 CA15P2-201ENST00000611168 834 ntBASIC18.62■□□□□ 0.57
UPK1BO75841 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1BO75841 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.62■□□□□ 0.57
UPK1BO75841 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.62■□□□□ 0.57
UPK1BO75841 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1BO75841 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
UPK1BO75841 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1BO75841 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1BO75841 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
UPK1BO75841 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
UPK1BO75841 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1BO75841 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK1BO75841 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
UPK1BO75841 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
UPK1BO75841 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
UPK1BO75841 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
UPK1BO75841 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1BO75841 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1BO75841 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1BO75841 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.61■□□□□ 0.57
UPK1BO75841 AL592295.1-201ENST00000400984 884 ntBASIC18.61■□□□□ 0.57
UPK1BO75841 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
UPK1BO75841 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1BO75841 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
UPK1BO75841 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
UPK1BO75841 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1BO75841 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
UPK1BO75841 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1BO75841 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.61■□□□□ 0.57
UPK1BO75841 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1BO75841 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.61■□□□□ 0.57
UPK1BO75841 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1BO75841 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
UPK1BO75841 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UPK1BO75841 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.6■□□□□ 0.57
UPK1BO75841 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1BO75841 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1BO75841 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1BO75841 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
UPK1BO75841 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1BO75841 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.6■□□□□ 0.57
UPK1BO75841 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.6■□□□□ 0.57
UPK1BO75841 DUX4L11-201ENST00000611504 1267 ntBASIC18.6■□□□□ 0.57
UPK1BO75841 DUX4L12-201ENST00000614593 1267 ntBASIC18.6■□□□□ 0.57
UPK1BO75841 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.6■□□□□ 0.57
UPK1BO75841 DUX4L14-201ENST00000621227 1267 ntBASIC18.6■□□□□ 0.57
UPK1BO75841 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1BO75841 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
UPK1BO75841 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
UPK1BO75841 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1BO75841 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1BO75841 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UPK1BO75841 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1BO75841 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1BO75841 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms