Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BckdkO55028 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BckdkO55028 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BckdkO55028 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BckdkO55028 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BckdkO55028 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
BckdkO55028 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BckdkO55028 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BckdkO55028 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BckdkO55028 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BckdkO55028 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BckdkO55028 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BckdkO55028 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BckdkO55028 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BckdkO55028 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BckdkO55028 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BckdkO55028 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BckdkO55028 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BckdkO55028 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.38■□□□□ 0.37
BckdkO55028 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BckdkO55028 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BckdkO55028 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BckdkO55028 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BckdkO55028 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BckdkO55028 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BckdkO55028 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.37■□□□□ 0.37
BckdkO55028 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
BckdkO55028 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
BckdkO55028 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BckdkO55028 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BckdkO55028 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BckdkO55028 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.37■□□□□ 0.37
BckdkO55028 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BckdkO55028 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BckdkO55028 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BckdkO55028 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BckdkO55028 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
BckdkO55028 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BckdkO55028 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
BckdkO55028 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BckdkO55028 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
BckdkO55028 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
BckdkO55028 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
BckdkO55028 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
BckdkO55028 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
BckdkO55028 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BckdkO55028 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.36■□□□□ 0.37
BckdkO55028 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.36■□□□□ 0.37
BckdkO55028 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BckdkO55028 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BckdkO55028 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
BckdkO55028 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.35■□□□□ 0.37
BckdkO55028 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BckdkO55028 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
BckdkO55028 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BckdkO55028 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BckdkO55028 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.35■□□□□ 0.37
BckdkO55028 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BckdkO55028 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BckdkO55028 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.35■□□□□ 0.37
BckdkO55028 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
BckdkO55028 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BckdkO55028 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
BckdkO55028 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BckdkO55028 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BckdkO55028 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
BckdkO55028 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
BckdkO55028 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BckdkO55028 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BckdkO55028 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BckdkO55028 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BckdkO55028 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BckdkO55028 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BckdkO55028 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
BckdkO55028 Reep4-203ENSMUST00000226563 1444 ntBASIC17.34■□□□□ 0.37
BckdkO55028 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BckdkO55028 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BckdkO55028 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
BckdkO55028 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BckdkO55028 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BckdkO55028 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
BckdkO55028 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BckdkO55028 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BckdkO55028 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
BckdkO55028 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BckdkO55028 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BckdkO55028 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
BckdkO55028 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BckdkO55028 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
BckdkO55028 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BckdkO55028 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.33■□□□□ 0.36
BckdkO55028 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BckdkO55028 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.33■□□□□ 0.36
BckdkO55028 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
BckdkO55028 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.33■□□□□ 0.36
BckdkO55028 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.33■□□□□ 0.36
BckdkO55028 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BckdkO55028 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
BckdkO55028 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
BckdkO55028 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 109.4 ms