Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Shisa8J3QNX5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa8J3QNX5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa8J3QNX5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa8J3QNX5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shisa8J3QNX5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shisa8J3QNX5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Shisa8J3QNX5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa8J3QNX5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa8J3QNX5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa8J3QNX5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shisa8J3QNX5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Shisa8J3QNX5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Shisa8J3QNX5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Shisa8J3QNX5 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.09■□□□□ 0.33
Shisa8J3QNX5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa8J3QNX5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.09■□□□□ 0.33
Shisa8J3QNX5 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.09■□□□□ 0.33
Shisa8J3QNX5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa8J3QNX5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Shisa8J3QNX5 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa8J3QNX5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa8J3QNX5 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.09■□□□□ 0.33
Shisa8J3QNX5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa8J3QNX5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa8J3QNX5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shisa8J3QNX5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shisa8J3QNX5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Shisa8J3QNX5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shisa8J3QNX5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Shisa8J3QNX5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Shisa8J3QNX5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Shisa8J3QNX5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shisa8J3QNX5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shisa8J3QNX5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shisa8J3QNX5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shisa8J3QNX5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.08■□□□□ 0.32
Shisa8J3QNX5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shisa8J3QNX5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shisa8J3QNX5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shisa8J3QNX5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shisa8J3QNX5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Shisa8J3QNX5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.07■□□□□ 0.32
Shisa8J3QNX5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shisa8J3QNX5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Shisa8J3QNX5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shisa8J3QNX5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shisa8J3QNX5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shisa8J3QNX5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shisa8J3QNX5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shisa8J3QNX5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms