Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.3■■□□□ 1
TBC1D3FA6NER0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TBC1D3FA6NER0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TBC1D3FA6NER0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TBC1D3FA6NER0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TBC1D3FA6NER0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TBC1D3FA6NER0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TBC1D3FA6NER0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TBC1D3FA6NER0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TBC1D3FA6NER0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.29■■□□□ 1
TBC1D3FA6NER0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.29■■□□□ 1
TBC1D3FA6NER0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.29■■□□□ 1
TBC1D3FA6NER0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.29■■□□□ 1
TBC1D3FA6NER0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.29■■□□□ 1
TBC1D3FA6NER0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TBC1D3FA6NER0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.29■■□□□ 1
TBC1D3FA6NER0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3FA6NER0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3FA6NER0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3FA6NER0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3FA6NER0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3FA6NER0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3FA6NER0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3FA6NER0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.28■■□□□ 1
TBC1D3FA6NER0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3FA6NER0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
TBC1D3FA6NER0 AL355802.2-201ENST00000402069 882 ntBASIC21.28■■□□□ 1
TBC1D3FA6NER0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3FA6NER0 EEF1DP3-203ENST00000566025 782 ntBASIC21.28■■□□□ 1
TBC1D3FA6NER0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.28■■□□□ 1
TBC1D3FA6NER0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 1
TBC1D3FA6NER0 AC053503.5-201ENST00000601508 636 ntBASIC21.28■■□□□ 1
TBC1D3FA6NER0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3FA6NER0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3FA6NER0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3FA6NER0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3FA6NER0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
TBC1D3FA6NER0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3FA6NER0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D3FA6NER0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.27■■□□□ 1
TBC1D3FA6NER0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D3FA6NER0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D3FA6NER0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D3FA6NER0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.27■■□□□ 1
TBC1D3FA6NER0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D3FA6NER0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D3FA6NER0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.27■■□□□ 1
TBC1D3FA6NER0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D3FA6NER0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TBC1D3FA6NER0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TBC1D3FA6NER0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.27■□□□□ 0.99
TBC1D3FA6NER0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.26■□□□□ 0.99
TBC1D3FA6NER0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TBC1D3FA6NER0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TBC1D3FA6NER0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.26■□□□□ 0.99
TBC1D3FA6NER0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.26■□□□□ 0.99
TBC1D3FA6NER0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.26■□□□□ 0.99
TBC1D3FA6NER0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.26■□□□□ 0.99
TBC1D3FA6NER0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.26■□□□□ 0.99
TBC1D3FA6NER0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.26■□□□□ 0.99
TBC1D3FA6NER0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.26■□□□□ 0.99
TBC1D3FA6NER0 AC005181.1-201ENST00000604782 1256 ntBASIC21.26■□□□□ 0.99
TBC1D3FA6NER0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.26■□□□□ 0.99
TBC1D3FA6NER0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.26■□□□□ 0.99
TBC1D3FA6NER0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TBC1D3FA6NER0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.26■□□□□ 0.99
TBC1D3FA6NER0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
TBC1D3FA6NER0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TBC1D3FA6NER0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TBC1D3FA6NER0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3FA6NER0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3FA6NER0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.25■□□□□ 0.99
TBC1D3FA6NER0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.25■□□□□ 0.99
TBC1D3FA6NER0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3FA6NER0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3FA6NER0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3FA6NER0 AC083906.2-201ENST00000511578 360 ntBASIC21.25■□□□□ 0.99
TBC1D3FA6NER0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3FA6NER0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.25■□□□□ 0.99
TBC1D3FA6NER0 AL121832.2-201ENST00000610979 668 ntBASIC21.25■□□□□ 0.99
TBC1D3FA6NER0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.25■□□□□ 0.99
TBC1D3FA6NER0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.25■□□□□ 0.99
TBC1D3FA6NER0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.25■□□□□ 0.99
TBC1D3FA6NER0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3FA6NER0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3FA6NER0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TBC1D3FA6NER0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TBC1D3FA6NER0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TBC1D3FA6NER0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.24■□□□□ 0.99
TBC1D3FA6NER0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.24■□□□□ 0.99
TBC1D3FA6NER0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TBC1D3FA6NER0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
TBC1D3FA6NER0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.24■□□□□ 0.99
TBC1D3FA6NER0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
TBC1D3FA6NER0 AC010536.3-201ENST00000620306 533 ntBASIC21.24■□□□□ 0.99
TBC1D3FA6NER0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TBC1D3FA6NER0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TBC1D3FA6NER0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TBC1D3FA6NER0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TBC1D3FA6NER0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms