Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 KRT18P11-201ENST00000435214 1283 ntBASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 AC080038.1-201ENST00000611274 1154 ntBASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE7Q9UBL6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CPNE7Q9UBL6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CPNE7Q9UBL6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE7Q9UBL6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE7Q9UBL6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE7Q9UBL6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE7Q9UBL6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CPNE7Q9UBL6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE7Q9UBL6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.77■□□□□ 0.92
CPNE7Q9UBL6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.77■□□□□ 0.92
CPNE7Q9UBL6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE7Q9UBL6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE7Q9UBL6 BID-214ENST00000617586 542 ntTSL 5 BASIC20.77■□□□□ 0.92
CPNE7Q9UBL6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.77■□□□□ 0.92
CPNE7Q9UBL6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CPNE7Q9UBL6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE7Q9UBL6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE7Q9UBL6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE7Q9UBL6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.77■□□□□ 0.91
CPNE7Q9UBL6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CPNE7Q9UBL6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CPNE7Q9UBL6 AC127496.7-201ENST00000625110 1798 ntBASIC20.77■□□□□ 0.91
CPNE7Q9UBL6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.77■□□□□ 0.91
CPNE7Q9UBL6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.77■□□□□ 0.91
CPNE7Q9UBL6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE7Q9UBL6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE7Q9UBL6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.76■□□□□ 0.91
CPNE7Q9UBL6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE7Q9UBL6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE7Q9UBL6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE7Q9UBL6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
CPNE7Q9UBL6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.76■□□□□ 0.91
CPNE7Q9UBL6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE7Q9UBL6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE7Q9UBL6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CPNE7Q9UBL6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CPNE7Q9UBL6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE7Q9UBL6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 AP001160.3-201ENST00000601484 763 ntBASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE7Q9UBL6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE7Q9UBL6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE7Q9UBL6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CPNE7Q9UBL6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE7Q9UBL6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.74■□□□□ 0.91
CPNE7Q9UBL6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE7Q9UBL6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.74■□□□□ 0.91
CPNE7Q9UBL6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.74■□□□□ 0.91
CPNE7Q9UBL6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE7Q9UBL6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE7Q9UBL6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.74■□□□□ 0.91
CPNE7Q9UBL6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE7Q9UBL6 AC080038.3-201ENST00000623346 1952 ntBASIC20.74■□□□□ 0.91
CPNE7Q9UBL6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE7Q9UBL6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE7Q9UBL6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.73■□□□□ 0.91
CPNE7Q9UBL6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE7Q9UBL6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.73■□□□□ 0.91
CPNE7Q9UBL6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.73■□□□□ 0.91
CPNE7Q9UBL6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE7Q9UBL6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE7Q9UBL6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE7Q9UBL6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.73■□□□□ 0.91
CPNE7Q9UBL6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE7Q9UBL6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms