Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCRT1Q9BWW7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.11■□□□□ 0.33
SCRT1Q9BWW7 AC144652.1-201ENST00000609974 1624 ntBASIC17.1■□□□□ 0.33
SCRT1Q9BWW7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCRT1Q9BWW7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.1■□□□□ 0.33
SCRT1Q9BWW7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SCRT1Q9BWW7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCRT1Q9BWW7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCRT1Q9BWW7 AC103834.1-201ENST00000520383 144 ntBASIC17.1■□□□□ 0.33
SCRT1Q9BWW7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.1■□□□□ 0.33
SCRT1Q9BWW7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCRT1Q9BWW7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCRT1Q9BWW7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCRT1Q9BWW7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.1■□□□□ 0.33
SCRT1Q9BWW7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCRT1Q9BWW7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SCRT1Q9BWW7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SCRT1Q9BWW7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SCRT1Q9BWW7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCRT1Q9BWW7 AFG3L1P-217ENST00000557444 2447 ntBASIC17.09■□□□□ 0.33
SCRT1Q9BWW7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.09■□□□□ 0.33
SCRT1Q9BWW7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SCRT1Q9BWW7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCRT1Q9BWW7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.09■□□□□ 0.33
SCRT1Q9BWW7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SCRT1Q9BWW7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.09■□□□□ 0.33
SCRT1Q9BWW7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCRT1Q9BWW7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SCRT1Q9BWW7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCRT1Q9BWW7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCRT1Q9BWW7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCRT1Q9BWW7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.09■□□□□ 0.33
SCRT1Q9BWW7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCRT1Q9BWW7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCRT1Q9BWW7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
SCRT1Q9BWW7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.08■□□□□ 0.33
SCRT1Q9BWW7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
SCRT1Q9BWW7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SCRT1Q9BWW7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCRT1Q9BWW7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCRT1Q9BWW7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SCRT1Q9BWW7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SCRT1Q9BWW7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SCRT1Q9BWW7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SCRT1Q9BWW7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCRT1Q9BWW7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCRT1Q9BWW7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCRT1Q9BWW7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.08■□□□□ 0.32
SCRT1Q9BWW7 YBX1P4-201ENST00000392794 808 ntBASIC17.08■□□□□ 0.32
SCRT1Q9BWW7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.08■□□□□ 0.32
SCRT1Q9BWW7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.08■□□□□ 0.32
SCRT1Q9BWW7 AC103724.3-201ENST00000564481 992 ntBASIC17.08■□□□□ 0.32
SCRT1Q9BWW7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.08■□□□□ 0.32
SCRT1Q9BWW7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.08■□□□□ 0.32
SCRT1Q9BWW7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCRT1Q9BWW7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCRT1Q9BWW7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SCRT1Q9BWW7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.08■□□□□ 0.32
SCRT1Q9BWW7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCRT1Q9BWW7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
SCRT1Q9BWW7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCRT1Q9BWW7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.07■□□□□ 0.32
SCRT1Q9BWW7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SCRT1Q9BWW7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.07■□□□□ 0.32
SCRT1Q9BWW7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCRT1Q9BWW7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCRT1Q9BWW7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
SCRT1Q9BWW7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.07■□□□□ 0.32
SCRT1Q9BWW7 AC087289.5-201ENST00000586076 3175 ntBASIC17.07■□□□□ 0.32
SCRT1Q9BWW7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCRT1Q9BWW7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCRT1Q9BWW7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCRT1Q9BWW7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SCRT1Q9BWW7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCRT1Q9BWW7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCRT1Q9BWW7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.07■□□□□ 0.32
SCRT1Q9BWW7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SCRT1Q9BWW7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCRT1Q9BWW7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
SCRT1Q9BWW7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCRT1Q9BWW7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms