Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim33Q99PP7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim33Q99PP7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Trim33Q99PP7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim33Q99PP7 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.64■□□□□ 0.57
Trim33Q99PP7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trim33Q99PP7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim33Q99PP7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim33Q99PP7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim33Q99PP7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim33Q99PP7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim33Q99PP7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
Trim33Q99PP7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim33Q99PP7 Gm18284-201ENSMUST00000172604 624 ntBASIC18.63■□□□□ 0.57
Trim33Q99PP7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim33Q99PP7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim33Q99PP7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.63■□□□□ 0.57
Trim33Q99PP7 Gm9988-201ENSMUST00000069786 435 ntBASIC18.63■□□□□ 0.57
Trim33Q99PP7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.63■□□□□ 0.57
Trim33Q99PP7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim33Q99PP7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.63■□□□□ 0.57
Trim33Q99PP7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.63■□□□□ 0.57
Trim33Q99PP7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim33Q99PP7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim33Q99PP7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim33Q99PP7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim33Q99PP7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.62■□□□□ 0.57
Trim33Q99PP7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim33Q99PP7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Trim33Q99PP7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim33Q99PP7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim33Q99PP7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trim33Q99PP7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Trim33Q99PP7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim33Q99PP7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.61■□□□□ 0.57
Trim33Q99PP7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trim33Q99PP7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim33Q99PP7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim33Q99PP7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim33Q99PP7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.61■□□□□ 0.57
Trim33Q99PP7 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.61■□□□□ 0.57
Trim33Q99PP7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim33Q99PP7 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.61■□□□□ 0.57
Trim33Q99PP7 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.61■□□□□ 0.57
Trim33Q99PP7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim33Q99PP7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim33Q99PP7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim33Q99PP7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Trim33Q99PP7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trim33Q99PP7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim33Q99PP7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim33Q99PP7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trim33Q99PP7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.6■□□□□ 0.57
Trim33Q99PP7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim33Q99PP7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim33Q99PP7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim33Q99PP7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim33Q99PP7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
Trim33Q99PP7 Gm5874-201ENSMUST00000096101 508 ntBASIC18.6■□□□□ 0.57
Trim33Q99PP7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim33Q99PP7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim33Q99PP7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim33Q99PP7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim33Q99PP7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trim33Q99PP7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim33Q99PP7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trim33Q99PP7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim33Q99PP7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trim33Q99PP7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Trim33Q99PP7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim33Q99PP7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Trim33Q99PP7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim33Q99PP7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim33Q99PP7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim33Q99PP7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim33Q99PP7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim33Q99PP7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim33Q99PP7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim33Q99PP7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim33Q99PP7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim33Q99PP7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim33Q99PP7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trim33Q99PP7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim33Q99PP7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim33Q99PP7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim33Q99PP7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim33Q99PP7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim33Q99PP7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim33Q99PP7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Trim33Q99PP7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim33Q99PP7 Gm7860-201ENSMUST00000121190 879 ntBASIC18.58■□□□□ 0.56
Trim33Q99PP7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim33Q99PP7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim33Q99PP7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Trim33Q99PP7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim33Q99PP7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim33Q99PP7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim33Q99PP7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim33Q99PP7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim33Q99PP7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms