Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMOQ99835 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMOQ99835 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.56■■□□□ 1.2
SMOQ99835 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.56■■□□□ 1.2
SMOQ99835 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.56■■□□□ 1.2
SMOQ99835 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMOQ99835 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SMOQ99835 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMOQ99835 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMOQ99835 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
SMOQ99835 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.56■■□□□ 1.2
SMOQ99835 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.56■■□□□ 1.2
SMOQ99835 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMOQ99835 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMOQ99835 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SMOQ99835 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.55■■□□□ 1.2
SMOQ99835 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
SMOQ99835 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.55■■□□□ 1.2
SMOQ99835 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.55■■□□□ 1.2
SMOQ99835 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMOQ99835 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.55■■□□□ 1.2
SMOQ99835 IKBKGP1-201ENST00000612193 1073 ntBASIC22.55■■□□□ 1.2
SMOQ99835 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMOQ99835 AC026471.6-201ENST00000622954 1905 ntBASIC22.55■■□□□ 1.2
SMOQ99835 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMOQ99835 KRT87P-202ENST00000534226 1464 ntBASIC22.54■■□□□ 1.2
SMOQ99835 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMOQ99835 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMOQ99835 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SMOQ99835 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMOQ99835 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.54■■□□□ 1.2
SMOQ99835 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.54■■□□□ 1.2
SMOQ99835 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.54■■□□□ 1.2
SMOQ99835 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SMOQ99835 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SMOQ99835 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMOQ99835 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SMOQ99835 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMOQ99835 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
SMOQ99835 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.53■■□□□ 1.2
SMOQ99835 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.53■■□□□ 1.2
SMOQ99835 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SMOQ99835 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMOQ99835 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SMOQ99835 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.53■■□□□ 1.2
SMOQ99835 AC092437.1-201ENST00000624794 1048 ntBASIC22.53■■□□□ 1.2
SMOQ99835 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SMOQ99835 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SMOQ99835 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.52■■□□□ 1.2
SMOQ99835 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.52■■□□□ 1.2
SMOQ99835 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SMOQ99835 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.52■■□□□ 1.2
SMOQ99835 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
SMOQ99835 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.52■■□□□ 1.2
SMOQ99835 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SMOQ99835 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.52■■□□□ 1.2
SMOQ99835 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SMOQ99835 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
SMOQ99835 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SMOQ99835 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMOQ99835 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SMOQ99835 ECEL1P1-201ENST00000373592 1742 ntBASIC22.51■■□□□ 1.19
SMOQ99835 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SMOQ99835 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SMOQ99835 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMOQ99835 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMOQ99835 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SMOQ99835 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.51■■□□□ 1.19
SMOQ99835 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.51■■□□□ 1.19
SMOQ99835 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.51■■□□□ 1.19
SMOQ99835 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
SMOQ99835 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.51■■□□□ 1.19
SMOQ99835 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMOQ99835 FAM99A-202ENST00000538190 1989 ntBASIC22.5■■□□□ 1.19
SMOQ99835 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMOQ99835 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SMOQ99835 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.5■■□□□ 1.19
SMOQ99835 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.5■■□□□ 1.19
SMOQ99835 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.5■■□□□ 1.19
SMOQ99835 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.5■■□□□ 1.19
SMOQ99835 AC104187.1-201ENST00000607510 612 ntBASIC22.5■■□□□ 1.19
SMOQ99835 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SMOQ99835 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
SMOQ99835 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.5■■□□□ 1.19
SMOQ99835 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.5■■□□□ 1.19
SMOQ99835 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SMOQ99835 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMOQ99835 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMOQ99835 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
SMOQ99835 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.49■■□□□ 1.19
SMOQ99835 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.49■■□□□ 1.19
SMOQ99835 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
SMOQ99835 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.49■■□□□ 1.19
SMOQ99835 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMOQ99835 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMOQ99835 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMOQ99835 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMOQ99835 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SMOQ99835 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.48■■□□□ 1.19
SMOQ99835 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms