Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
CHCHD1Q96BP2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHCHD1Q96BP2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHCHD1Q96BP2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHCHD1Q96BP2 AFG3L1P-217ENST00000557444 2447 ntBASIC15.6■□□□□ 0.09
CHCHD1Q96BP2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHCHD1Q96BP2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHCHD1Q96BP2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC15.6■□□□□ 0.09
CHCHD1Q96BP2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHCHD1Q96BP2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHCHD1Q96BP2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.6■□□□□ 0.09
CHCHD1Q96BP2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHCHD1Q96BP2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHCHD1Q96BP2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHCHD1Q96BP2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CHCHD1Q96BP2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHCHD1Q96BP2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHCHD1Q96BP2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CHCHD1Q96BP2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHCHD1Q96BP2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHCHD1Q96BP2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHCHD1Q96BP2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHCHD1Q96BP2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CHCHD1Q96BP2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHCHD1Q96BP2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHCHD1Q96BP2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CHCHD1Q96BP2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHCHD1Q96BP2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHCHD1Q96BP2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
CHCHD1Q96BP2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHCHD1Q96BP2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHCHD1Q96BP2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CHCHD1Q96BP2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.58■□□□□ 0.09
CHCHD1Q96BP2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC15.58■□□□□ 0.09
CHCHD1Q96BP2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHCHD1Q96BP2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.58■□□□□ 0.09
CHCHD1Q96BP2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHCHD1Q96BP2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 DUX4L11-201ENST00000611504 1267 ntBASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 DUX4L12-201ENST00000614593 1267 ntBASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 DUX4L14-201ENST00000621227 1267 ntBASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 AC018445.3-201ENST00000624177 1945 ntBASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHCHD1Q96BP2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHCHD1Q96BP2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 SMG8-203ENST00000578922 2178 ntBASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHCHD1Q96BP2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms