Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT78Q8N1N4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT78Q8N1N4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
KRT78Q8N1N4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.65■□□□□ 0.9
KRT78Q8N1N4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT78Q8N1N4 MIR572-201ENST00000384983 95 ntBASIC20.65■□□□□ 0.9
KRT78Q8N1N4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.65■□□□□ 0.9
KRT78Q8N1N4 AC105233.4-201ENST00000642045 216 ntBASIC20.65■□□□□ 0.9
KRT78Q8N1N4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
KRT78Q8N1N4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.65■□□□□ 0.9
KRT78Q8N1N4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
KRT78Q8N1N4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT78Q8N1N4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
KRT78Q8N1N4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
KRT78Q8N1N4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
KRT78Q8N1N4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
KRT78Q8N1N4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.64■□□□□ 0.89
KRT78Q8N1N4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.64■□□□□ 0.89
KRT78Q8N1N4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT78Q8N1N4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
KRT78Q8N1N4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.64■□□□□ 0.89
KRT78Q8N1N4 MIR638-201ENST00000385237 100 ntBASIC20.64■□□□□ 0.89
KRT78Q8N1N4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT78Q8N1N4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.64■□□□□ 0.89
KRT78Q8N1N4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.64■□□□□ 0.89
KRT78Q8N1N4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.64■□□□□ 0.89
KRT78Q8N1N4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT78Q8N1N4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
KRT78Q8N1N4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT78Q8N1N4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT78Q8N1N4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT78Q8N1N4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
KRT78Q8N1N4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT78Q8N1N4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT78Q8N1N4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.63■□□□□ 0.89
KRT78Q8N1N4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.63■□□□□ 0.89
KRT78Q8N1N4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
KRT78Q8N1N4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT78Q8N1N4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRT78Q8N1N4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRT78Q8N1N4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT78Q8N1N4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRT78Q8N1N4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT78Q8N1N4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT78Q8N1N4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KRT78Q8N1N4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT78Q8N1N4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT78Q8N1N4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT78Q8N1N4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT78Q8N1N4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT78Q8N1N4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.62■□□□□ 0.89
KRT78Q8N1N4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.62■□□□□ 0.89
KRT78Q8N1N4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.62■□□□□ 0.89
KRT78Q8N1N4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
KRT78Q8N1N4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KRT78Q8N1N4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT78Q8N1N4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT78Q8N1N4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KRT78Q8N1N4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT78Q8N1N4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KRT78Q8N1N4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT78Q8N1N4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT78Q8N1N4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRT78Q8N1N4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.61■□□□□ 0.89
KRT78Q8N1N4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT78Q8N1N4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT78Q8N1N4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.61■□□□□ 0.89
KRT78Q8N1N4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRT78Q8N1N4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT78Q8N1N4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
KRT78Q8N1N4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT78Q8N1N4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
KRT78Q8N1N4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT78Q8N1N4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
KRT78Q8N1N4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
KRT78Q8N1N4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT78Q8N1N4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRT78Q8N1N4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT78Q8N1N4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRT78Q8N1N4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.6■□□□□ 0.89
KRT78Q8N1N4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.6■□□□□ 0.89
KRT78Q8N1N4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRT78Q8N1N4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT78Q8N1N4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT78Q8N1N4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT78Q8N1N4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
KRT78Q8N1N4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT78Q8N1N4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT78Q8N1N4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.6■□□□□ 0.89
KRT78Q8N1N4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT78Q8N1N4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT78Q8N1N4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT78Q8N1N4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms