Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
XRN1Q8IZH2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC30.16■■■□□ 2.42
XRN1Q8IZH2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC30.15■■■□□ 2.42
XRN1Q8IZH2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
XRN1Q8IZH2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC30.15■■■□□ 2.42
XRN1Q8IZH2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC30.15■■■□□ 2.42
XRN1Q8IZH2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
XRN1Q8IZH2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
XRN1Q8IZH2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
XRN1Q8IZH2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
XRN1Q8IZH2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
XRN1Q8IZH2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC30.14■■■□□ 2.42
XRN1Q8IZH2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
XRN1Q8IZH2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC30.14■■■□□ 2.42
XRN1Q8IZH2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
XRN1Q8IZH2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC30.14■■■□□ 2.42
XRN1Q8IZH2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
XRN1Q8IZH2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
XRN1Q8IZH2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC30.14■■■□□ 2.41
XRN1Q8IZH2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
XRN1Q8IZH2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC30.14■■■□□ 2.41
XRN1Q8IZH2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
XRN1Q8IZH2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC30.13■■■□□ 2.41
XRN1Q8IZH2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC30.13■■■□□ 2.41
XRN1Q8IZH2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
XRN1Q8IZH2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC30.13■■■□□ 2.41
XRN1Q8IZH2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC30.13■■■□□ 2.41
XRN1Q8IZH2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC30.13■■■□□ 2.41
XRN1Q8IZH2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC30.13■■■□□ 2.41
XRN1Q8IZH2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC30.13■■■□□ 2.41
XRN1Q8IZH2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
XRN1Q8IZH2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
XRN1Q8IZH2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
XRN1Q8IZH2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC30.12■■■□□ 2.41
XRN1Q8IZH2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
XRN1Q8IZH2 ESRRAP1-201ENST00000400596 1257 ntBASIC30.12■■■□□ 2.41
XRN1Q8IZH2 AL596275.1-201ENST00000423464 877 ntBASIC30.12■■■□□ 2.41
XRN1Q8IZH2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
XRN1Q8IZH2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC30.12■■■□□ 2.41
XRN1Q8IZH2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
XRN1Q8IZH2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
XRN1Q8IZH2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
XRN1Q8IZH2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
XRN1Q8IZH2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
XRN1Q8IZH2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
XRN1Q8IZH2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC30.11■■■□□ 2.41
XRN1Q8IZH2 AL162412.1-201ENST00000567129 965 ntBASIC30.11■■■□□ 2.41
XRN1Q8IZH2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC30.11■■■□□ 2.41
XRN1Q8IZH2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC30.11■■■□□ 2.41
XRN1Q8IZH2 AC020928.2-201ENST00000588717 2197 ntBASIC30.11■■■□□ 2.41
XRN1Q8IZH2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC30.11■■■□□ 2.41
XRN1Q8IZH2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
XRN1Q8IZH2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 AC006058.3-201ENST00000606217 1069 ntBASIC30.1■■■□□ 2.41
XRN1Q8IZH2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 AC092068.2-201ENST00000590491 1708 ntBASIC30.1■■■□□ 2.41
XRN1Q8IZH2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
XRN1Q8IZH2 AC010980.2-201ENST00000587099 1412 ntBASIC30.09■■■□□ 2.41
XRN1Q8IZH2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC30.09■■■□□ 2.41
XRN1Q8IZH2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC30.09■■■□□ 2.41
XRN1Q8IZH2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC30.09■■■□□ 2.41
XRN1Q8IZH2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
XRN1Q8IZH2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
XRN1Q8IZH2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC30.08■■■□□ 2.41
XRN1Q8IZH2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC30.08■■■□□ 2.41
XRN1Q8IZH2 UNC93B5-201ENST00000530315 699 ntBASIC30.08■■■□□ 2.41
XRN1Q8IZH2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
XRN1Q8IZH2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
XRN1Q8IZH2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
XRN1Q8IZH2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
XRN1Q8IZH2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
XRN1Q8IZH2 LINC00526-201ENST00000581067 1875 ntBASIC30.08■■■□□ 2.41
XRN1Q8IZH2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
XRN1Q8IZH2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC30.08■■■□□ 2.41
XRN1Q8IZH2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC30.08■■■□□ 2.41
XRN1Q8IZH2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC30.08■■■□□ 2.41
XRN1Q8IZH2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC30.08■■■□□ 2.41
XRN1Q8IZH2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
XRN1Q8IZH2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC30.07■■■□□ 2.4
XRN1Q8IZH2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
XRN1Q8IZH2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
XRN1Q8IZH2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms