Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scube3Q66PY1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scube3Q66PY1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scube3Q66PY1 Gm6420-201ENSMUST00000193885 723 ntBASIC19.83■□□□□ 0.77
Scube3Q66PY1 Gm37179-201ENSMUST00000194862 823 ntBASIC19.83■□□□□ 0.77
Scube3Q66PY1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scube3Q66PY1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scube3Q66PY1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Scube3Q66PY1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scube3Q66PY1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scube3Q66PY1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scube3Q66PY1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scube3Q66PY1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scube3Q66PY1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.82■□□□□ 0.76
Scube3Q66PY1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scube3Q66PY1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scube3Q66PY1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scube3Q66PY1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scube3Q66PY1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scube3Q66PY1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.81■□□□□ 0.76
Scube3Q66PY1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.81■□□□□ 0.76
Scube3Q66PY1 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scube3Q66PY1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scube3Q66PY1 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.81■□□□□ 0.76
Scube3Q66PY1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scube3Q66PY1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scube3Q66PY1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scube3Q66PY1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scube3Q66PY1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scube3Q66PY1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.8■□□□□ 0.76
Scube3Q66PY1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scube3Q66PY1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scube3Q66PY1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Scube3Q66PY1 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.8■□□□□ 0.76
Scube3Q66PY1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Scube3Q66PY1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scube3Q66PY1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scube3Q66PY1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Scube3Q66PY1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Scube3Q66PY1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scube3Q66PY1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Scube3Q66PY1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.79■□□□□ 0.76
Scube3Q66PY1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.79■□□□□ 0.76
Scube3Q66PY1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scube3Q66PY1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scube3Q66PY1 Nespas-201ENSMUST00000143738 1083 ntBASIC19.79■□□□□ 0.76
Scube3Q66PY1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.79■□□□□ 0.76
Scube3Q66PY1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.79■□□□□ 0.76
Scube3Q66PY1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Scube3Q66PY1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scube3Q66PY1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scube3Q66PY1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scube3Q66PY1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scube3Q66PY1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scube3Q66PY1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scube3Q66PY1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scube3Q66PY1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scube3Q66PY1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scube3Q66PY1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scube3Q66PY1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.78■□□□□ 0.76
Scube3Q66PY1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scube3Q66PY1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scube3Q66PY1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scube3Q66PY1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scube3Q66PY1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scube3Q66PY1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scube3Q66PY1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scube3Q66PY1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scube3Q66PY1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scube3Q66PY1 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.77■□□□□ 0.76
Scube3Q66PY1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scube3Q66PY1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scube3Q66PY1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Scube3Q66PY1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.77■□□□□ 0.76
Scube3Q66PY1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scube3Q66PY1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scube3Q66PY1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scube3Q66PY1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Scube3Q66PY1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scube3Q66PY1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scube3Q66PY1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms