Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 AC010542.4-201ENST00000563151 1910 ntBASIC17.27■□□□□ 0.36
VMA21Q3ZAQ7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VMA21Q3ZAQ7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VMA21Q3ZAQ7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VMA21Q3ZAQ7 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.27■□□□□ 0.36
VMA21Q3ZAQ7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VMA21Q3ZAQ7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VMA21Q3ZAQ7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VMA21Q3ZAQ7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VMA21Q3ZAQ7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VMA21Q3ZAQ7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
VMA21Q3ZAQ7 UNC93B3-201ENST00000308076 687 ntBASIC17.27■□□□□ 0.36
VMA21Q3ZAQ7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VMA21Q3ZAQ7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.27■□□□□ 0.36
VMA21Q3ZAQ7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VMA21Q3ZAQ7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.27■□□□□ 0.36
VMA21Q3ZAQ7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.27■□□□□ 0.36
VMA21Q3ZAQ7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.27■□□□□ 0.36
VMA21Q3ZAQ7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.27■□□□□ 0.35
VMA21Q3ZAQ7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
VMA21Q3ZAQ7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.27■□□□□ 0.35
VMA21Q3ZAQ7 AC008406.3-201ENST00000620001 1374 ntBASIC17.27■□□□□ 0.35
VMA21Q3ZAQ7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
VMA21Q3ZAQ7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.26■□□□□ 0.35
VMA21Q3ZAQ7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VMA21Q3ZAQ7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VMA21Q3ZAQ7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
VMA21Q3ZAQ7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VMA21Q3ZAQ7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VMA21Q3ZAQ7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VMA21Q3ZAQ7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
VMA21Q3ZAQ7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VMA21Q3ZAQ7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VMA21Q3ZAQ7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VMA21Q3ZAQ7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.25■□□□□ 0.35
VMA21Q3ZAQ7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VMA21Q3ZAQ7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.25■□□□□ 0.35
VMA21Q3ZAQ7 BX842568.3-201ENST00000418104 571 ntBASIC17.25■□□□□ 0.35
VMA21Q3ZAQ7 AC104564.3-201ENST00000582367 638 ntBASIC17.25■□□□□ 0.35
VMA21Q3ZAQ7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.25■□□□□ 0.35
VMA21Q3ZAQ7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
VMA21Q3ZAQ7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.25■□□□□ 0.35
VMA21Q3ZAQ7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VMA21Q3ZAQ7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.25■□□□□ 0.35
VMA21Q3ZAQ7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 MIR4767-201ENST00000582827 78 ntBASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 AL136162.1-201ENST00000607711 1078 ntBASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
VMA21Q3ZAQ7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.23■□□□□ 0.35
VMA21Q3ZAQ7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.23■□□□□ 0.35
VMA21Q3ZAQ7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VMA21Q3ZAQ7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VMA21Q3ZAQ7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
VMA21Q3ZAQ7 AC244015.2-201ENST00000616358 1861 ntBASIC17.23■□□□□ 0.35
VMA21Q3ZAQ7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VMA21Q3ZAQ7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
VMA21Q3ZAQ7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.23■□□□□ 0.35
VMA21Q3ZAQ7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.23■□□□□ 0.35
VMA21Q3ZAQ7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VMA21Q3ZAQ7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VMA21Q3ZAQ7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.23■□□□□ 0.35
VMA21Q3ZAQ7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VMA21Q3ZAQ7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VMA21Q3ZAQ7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.23■□□□□ 0.35
VMA21Q3ZAQ7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VMA21Q3ZAQ7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
VMA21Q3ZAQ7 AC135279.3-201ENST00000610945 1311 ntBASIC17.22■□□□□ 0.35
VMA21Q3ZAQ7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VMA21Q3ZAQ7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VMA21Q3ZAQ7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VMA21Q3ZAQ7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.22■□□□□ 0.35
VMA21Q3ZAQ7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.22■□□□□ 0.35
VMA21Q3ZAQ7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VMA21Q3ZAQ7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
VMA21Q3ZAQ7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VMA21Q3ZAQ7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VMA21Q3ZAQ7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.22■□□□□ 0.35
VMA21Q3ZAQ7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VMA21Q3ZAQ7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
VMA21Q3ZAQ7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VMA21Q3ZAQ7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VMA21Q3ZAQ7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms