Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Uspl1Q3ULM6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Uspl1Q3ULM6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Uspl1Q3ULM6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Uspl1Q3ULM6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Uspl1Q3ULM6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Uspl1Q3ULM6 Gm6420-201ENSMUST00000193885 723 ntBASIC24.55■■□□□ 1.52
Uspl1Q3ULM6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Uspl1Q3ULM6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Uspl1Q3ULM6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Uspl1Q3ULM6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC24.55■■□□□ 1.52
Uspl1Q3ULM6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Uspl1Q3ULM6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Uspl1Q3ULM6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC24.54■■□□□ 1.52
Uspl1Q3ULM6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Uspl1Q3ULM6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Uspl1Q3ULM6 Gm27405-201ENSMUST00000184201 112 ntBASIC24.54■■□□□ 1.52
Uspl1Q3ULM6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Uspl1Q3ULM6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Uspl1Q3ULM6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC24.54■■□□□ 1.52
Uspl1Q3ULM6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Uspl1Q3ULM6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
Uspl1Q3ULM6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Uspl1Q3ULM6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Uspl1Q3ULM6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Uspl1Q3ULM6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Uspl1Q3ULM6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Uspl1Q3ULM6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Uspl1Q3ULM6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC24.53■■□□□ 1.52
Uspl1Q3ULM6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC24.53■■□□□ 1.52
Uspl1Q3ULM6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Uspl1Q3ULM6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Uspl1Q3ULM6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Uspl1Q3ULM6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
Uspl1Q3ULM6 Gm15853-202ENSMUST00000195518 2041 ntBASIC24.52■■□□□ 1.52
Uspl1Q3ULM6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Uspl1Q3ULM6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC24.52■■□□□ 1.52
Uspl1Q3ULM6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Uspl1Q3ULM6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Uspl1Q3ULM6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Uspl1Q3ULM6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Uspl1Q3ULM6 Gm9885-202ENSMUST00000186234 2209 ntBASIC24.51■■□□□ 1.51
Uspl1Q3ULM6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Uspl1Q3ULM6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Uspl1Q3ULM6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Uspl1Q3ULM6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC24.51■■□□□ 1.51
Uspl1Q3ULM6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Uspl1Q3ULM6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Uspl1Q3ULM6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Uspl1Q3ULM6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Uspl1Q3ULM6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Uspl1Q3ULM6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Uspl1Q3ULM6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Uspl1Q3ULM6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Uspl1Q3ULM6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Uspl1Q3ULM6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Uspl1Q3ULM6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Uspl1Q3ULM6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Uspl1Q3ULM6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Uspl1Q3ULM6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Uspl1Q3ULM6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Uspl1Q3ULM6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Uspl1Q3ULM6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Uspl1Q3ULM6 Gm10167-201ENSMUST00000150411 1479 ntBASIC24.5■■□□□ 1.51
Uspl1Q3ULM6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Uspl1Q3ULM6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Uspl1Q3ULM6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Uspl1Q3ULM6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Uspl1Q3ULM6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Uspl1Q3ULM6 Nespas-201ENSMUST00000143738 1083 ntBASIC24.49■■□□□ 1.51
Uspl1Q3ULM6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC24.49■■□□□ 1.51
Uspl1Q3ULM6 Gm7291-201ENSMUST00000199147 382 ntBASIC24.49■■□□□ 1.51
Uspl1Q3ULM6 Gm19094-201ENSMUST00000209791 1246 ntBASIC24.49■■□□□ 1.51
Uspl1Q3ULM6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Uspl1Q3ULM6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC24.49■■□□□ 1.51
Uspl1Q3ULM6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Uspl1Q3ULM6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
Uspl1Q3ULM6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Uspl1Q3ULM6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Uspl1Q3ULM6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Uspl1Q3ULM6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Uspl1Q3ULM6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Uspl1Q3ULM6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Uspl1Q3ULM6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Uspl1Q3ULM6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC24.48■■□□□ 1.51
Uspl1Q3ULM6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Uspl1Q3ULM6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Uspl1Q3ULM6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Uspl1Q3ULM6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Uspl1Q3ULM6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC24.47■■□□□ 1.51
Uspl1Q3ULM6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Uspl1Q3ULM6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Uspl1Q3ULM6 Golph3-205ENSMUST00000228671 2842 ntBASIC24.47■■□□□ 1.51
Uspl1Q3ULM6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Uspl1Q3ULM6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Uspl1Q3ULM6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Uspl1Q3ULM6 Gm43231-201ENSMUST00000202960 2258 ntBASIC24.47■■□□□ 1.51
Uspl1Q3ULM6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Uspl1Q3ULM6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Uspl1Q3ULM6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 167.2 ms