Protein–RNA interactions for Protein: Q3TYX8

Rufy4, RUN and FYVE domain-containing protein 4, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy4Q3TYX8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rufy4Q3TYX8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rufy4Q3TYX8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rufy4Q3TYX8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rufy4Q3TYX8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rufy4Q3TYX8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rufy4Q3TYX8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rufy4Q3TYX8 Gm27011-201ENSMUST00000182352 972 ntBASIC20.85■□□□□ 0.93
Rufy4Q3TYX8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.85■□□□□ 0.93
Rufy4Q3TYX8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.85■□□□□ 0.93
Rufy4Q3TYX8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.85■□□□□ 0.93
Rufy4Q3TYX8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.85■□□□□ 0.93
Rufy4Q3TYX8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rufy4Q3TYX8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rufy4Q3TYX8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rufy4Q3TYX8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Rufy4Q3TYX8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rufy4Q3TYX8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.84■□□□□ 0.93
Rufy4Q3TYX8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rufy4Q3TYX8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rufy4Q3TYX8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rufy4Q3TYX8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rufy4Q3TYX8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.83■□□□□ 0.93
Rufy4Q3TYX8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rufy4Q3TYX8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rufy4Q3TYX8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Rufy4Q3TYX8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rufy4Q3TYX8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.83■□□□□ 0.93
Rufy4Q3TYX8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Rufy4Q3TYX8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Rufy4Q3TYX8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.83■□□□□ 0.93
Rufy4Q3TYX8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rufy4Q3TYX8 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.83■□□□□ 0.93
Rufy4Q3TYX8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
Rufy4Q3TYX8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.83■□□□□ 0.92
Rufy4Q3TYX8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rufy4Q3TYX8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rufy4Q3TYX8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rufy4Q3TYX8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rufy4Q3TYX8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rufy4Q3TYX8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Rufy4Q3TYX8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rufy4Q3TYX8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rufy4Q3TYX8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Rufy4Q3TYX8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rufy4Q3TYX8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rufy4Q3TYX8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rufy4Q3TYX8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rufy4Q3TYX8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rufy4Q3TYX8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rufy4Q3TYX8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rufy4Q3TYX8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rufy4Q3TYX8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rufy4Q3TYX8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rufy4Q3TYX8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rufy4Q3TYX8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rufy4Q3TYX8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rufy4Q3TYX8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.81■□□□□ 0.92
Rufy4Q3TYX8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rufy4Q3TYX8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rufy4Q3TYX8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rufy4Q3TYX8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rufy4Q3TYX8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rufy4Q3TYX8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rufy4Q3TYX8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rufy4Q3TYX8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rufy4Q3TYX8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rufy4Q3TYX8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rufy4Q3TYX8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rufy4Q3TYX8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rufy4Q3TYX8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Rufy4Q3TYX8 Gm6211-202ENSMUST00000167849 925 ntBASIC20.8■□□□□ 0.92
Rufy4Q3TYX8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rufy4Q3TYX8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rufy4Q3TYX8 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.8■□□□□ 0.92
Rufy4Q3TYX8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Rufy4Q3TYX8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rufy4Q3TYX8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rufy4Q3TYX8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.79■□□□□ 0.92
Rufy4Q3TYX8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rufy4Q3TYX8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rufy4Q3TYX8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rufy4Q3TYX8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rufy4Q3TYX8 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.79■□□□□ 0.92
Rufy4Q3TYX8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rufy4Q3TYX8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rufy4Q3TYX8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rufy4Q3TYX8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rufy4Q3TYX8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Rufy4Q3TYX8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rufy4Q3TYX8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.78■□□□□ 0.92
Rufy4Q3TYX8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Rufy4Q3TYX8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rufy4Q3TYX8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rufy4Q3TYX8 Gm4968-201ENSMUST00000071458 858 ntBASIC20.78■□□□□ 0.92
Rufy4Q3TYX8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rufy4Q3TYX8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rufy4Q3TYX8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rufy4Q3TYX8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rufy4Q3TYX8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms