Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim63Q38HM4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim63Q38HM4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim63Q38HM4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim63Q38HM4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim63Q38HM4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim63Q38HM4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Trim63Q38HM4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim63Q38HM4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim63Q38HM4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim63Q38HM4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trim63Q38HM4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim63Q38HM4 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.69■□□□□ 0.1
Trim63Q38HM4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim63Q38HM4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim63Q38HM4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim63Q38HM4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.68■□□□□ 0.1
Trim63Q38HM4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim63Q38HM4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim63Q38HM4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim63Q38HM4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim63Q38HM4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim63Q38HM4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim63Q38HM4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim63Q38HM4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim63Q38HM4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.68■□□□□ 0.1
Trim63Q38HM4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim63Q38HM4 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim63Q38HM4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim63Q38HM4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Trim63Q38HM4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim63Q38HM4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim63Q38HM4 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim63Q38HM4 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Trim63Q38HM4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim63Q38HM4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim63Q38HM4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim63Q38HM4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim63Q38HM4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim63Q38HM4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim63Q38HM4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC15.67■□□□□ 0.1
Trim63Q38HM4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim63Q38HM4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.67■□□□□ 0.1
Trim63Q38HM4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trim63Q38HM4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim63Q38HM4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim63Q38HM4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trim63Q38HM4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim63Q38HM4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Trim63Q38HM4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim63Q38HM4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim63Q38HM4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim63Q38HM4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim63Q38HM4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim63Q38HM4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trim63Q38HM4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim63Q38HM4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim63Q38HM4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim63Q38HM4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim63Q38HM4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim63Q38HM4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim63Q38HM4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim63Q38HM4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim63Q38HM4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim63Q38HM4 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.65■□□□□ 0.1
Trim63Q38HM4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim63Q38HM4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim63Q38HM4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim63Q38HM4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim63Q38HM4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim63Q38HM4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim63Q38HM4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim63Q38HM4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim63Q38HM4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim63Q38HM4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim63Q38HM4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim63Q38HM4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim63Q38HM4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim63Q38HM4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim63Q38HM4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim63Q38HM4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim63Q38HM4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Trim63Q38HM4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.64■□□□□ 0.09
Trim63Q38HM4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim63Q38HM4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim63Q38HM4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim63Q38HM4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim63Q38HM4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Trim63Q38HM4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim63Q38HM4 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.63■□□□□ 0.09
Trim63Q38HM4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Trim63Q38HM4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trim63Q38HM4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim63Q38HM4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim63Q38HM4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim63Q38HM4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim63Q38HM4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim63Q38HM4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim63Q38HM4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trim63Q38HM4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms