Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.16■□□□□ 0.66
Thumpd3P97770 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Thumpd3P97770 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Thumpd3P97770 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Thumpd3P97770 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Thumpd3P97770 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Thumpd3P97770 Gm18284-201ENSMUST00000172604 624 ntBASIC19.16■□□□□ 0.66
Thumpd3P97770 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.16■□□□□ 0.66
Thumpd3P97770 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.16■□□□□ 0.66
Thumpd3P97770 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Thumpd3P97770 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Thumpd3P97770 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Thumpd3P97770 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Thumpd3P97770 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.16■□□□□ 0.66
Thumpd3P97770 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Thumpd3P97770 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Thumpd3P97770 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Thumpd3P97770 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Thumpd3P97770 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Thumpd3P97770 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Thumpd3P97770 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Thumpd3P97770 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.15■□□□□ 0.66
Thumpd3P97770 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Thumpd3P97770 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Thumpd3P97770 Gm8495-201ENSMUST00000188740 694 ntBASIC19.15■□□□□ 0.66
Thumpd3P97770 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
Thumpd3P97770 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Thumpd3P97770 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Thumpd3P97770 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Thumpd3P97770 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Thumpd3P97770 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Thumpd3P97770 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Thumpd3P97770 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Thumpd3P97770 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Thumpd3P97770 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Thumpd3P97770 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Thumpd3P97770 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Thumpd3P97770 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Thumpd3P97770 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
Thumpd3P97770 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.14■□□□□ 0.65
Thumpd3P97770 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Thumpd3P97770 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Thumpd3P97770 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Thumpd3P97770 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Thumpd3P97770 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Thumpd3P97770 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Thumpd3P97770 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Thumpd3P97770 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Thumpd3P97770 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.14■□□□□ 0.65
Thumpd3P97770 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thumpd3P97770 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thumpd3P97770 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Thumpd3P97770 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thumpd3P97770 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Thumpd3P97770 Gm12251-201ENSMUST00000117893 792 ntBASIC19.13■□□□□ 0.65
Thumpd3P97770 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Thumpd3P97770 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thumpd3P97770 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thumpd3P97770 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thumpd3P97770 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thumpd3P97770 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Thumpd3P97770 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thumpd3P97770 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thumpd3P97770 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thumpd3P97770 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thumpd3P97770 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.12■□□□□ 0.65
Thumpd3P97770 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Thumpd3P97770 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Thumpd3P97770 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Thumpd3P97770 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Thumpd3P97770 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Thumpd3P97770 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Thumpd3P97770 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Thumpd3P97770 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Thumpd3P97770 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Thumpd3P97770 Gm43173-201ENSMUST00000202246 593 ntBASIC19.12■□□□□ 0.65
Thumpd3P97770 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Thumpd3P97770 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Thumpd3P97770 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Thumpd3P97770 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Thumpd3P97770 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Thumpd3P97770 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Thumpd3P97770 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Thumpd3P97770 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Thumpd3P97770 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Thumpd3P97770 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.11■□□□□ 0.65
Thumpd3P97770 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Thumpd3P97770 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Thumpd3P97770 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.11■□□□□ 0.65
Thumpd3P97770 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Thumpd3P97770 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
Thumpd3P97770 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Thumpd3P97770 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Thumpd3P97770 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Thumpd3P97770 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Thumpd3P97770 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Thumpd3P97770 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Thumpd3P97770 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Thumpd3P97770 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Thumpd3P97770 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 309.5 ms