Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
Cacna1aP97445 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.46■□□□□ 0.39
Cacna1aP97445 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1aP97445 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1aP97445 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1aP97445 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.46■□□□□ 0.39
Cacna1aP97445 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.46■□□□□ 0.38
Cacna1aP97445 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.45■□□□□ 0.38
Cacna1aP97445 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1aP97445 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
Cacna1aP97445 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
Cacna1aP97445 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.45■□□□□ 0.38
Cacna1aP97445 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.45■□□□□ 0.38
Cacna1aP97445 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1aP97445 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1aP97445 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1aP97445 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1aP97445 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1aP97445 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Cacna1aP97445 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.44■□□□□ 0.38
Cacna1aP97445 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.44■□□□□ 0.38
Cacna1aP97445 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1aP97445 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1aP97445 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cacna1aP97445 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1aP97445 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cacna1aP97445 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1aP97445 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cacna1aP97445 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1aP97445 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1aP97445 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1aP97445 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1aP97445 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1aP97445 Mir5122-201ENSMUST00000175004 89 ntBASIC17.43■□□□□ 0.38
Cacna1aP97445 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1aP97445 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1aP97445 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1aP97445 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
Cacna1aP97445 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1aP97445 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1aP97445 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1aP97445 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1aP97445 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1aP97445 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1aP97445 Mir1199-201ENSMUST00000117015 119 ntBASIC17.43■□□□□ 0.38
Cacna1aP97445 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1aP97445 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.43■□□□□ 0.38
Cacna1aP97445 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1aP97445 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1aP97445 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1aP97445 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1aP97445 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1aP97445 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1aP97445 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1aP97445 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1aP97445 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cacna1aP97445 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.42■□□□□ 0.38
Cacna1aP97445 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.42■□□□□ 0.38
Cacna1aP97445 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.42■□□□□ 0.38
Cacna1aP97445 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1aP97445 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1aP97445 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.42■□□□□ 0.38
Cacna1aP97445 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1aP97445 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Cacna1aP97445 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1aP97445 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1aP97445 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1aP97445 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1aP97445 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1aP97445 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.41■□□□□ 0.38
Cacna1aP97445 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.41■□□□□ 0.38
Cacna1aP97445 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.41■□□□□ 0.38
Cacna1aP97445 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1aP97445 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1aP97445 Gm11249-201ENSMUST00000117071 859 ntBASIC17.4■□□□□ 0.38
Cacna1aP97445 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1aP97445 Gm10517-202ENSMUST00000192970 758 ntBASIC17.4■□□□□ 0.38
Cacna1aP97445 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.4■□□□□ 0.38
Cacna1aP97445 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cacna1aP97445 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1aP97445 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1aP97445 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1aP97445 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cacna1aP97445 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1aP97445 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1aP97445 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.4■□□□□ 0.38
Cacna1aP97445 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1aP97445 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1aP97445 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cacna1aP97445 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Cacna1aP97445 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1aP97445 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Cacna1aP97445 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1aP97445 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1aP97445 Gm10231-201ENSMUST00000181584 441 ntBASIC17.39■□□□□ 0.38
Cacna1aP97445 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cacna1aP97445 Gm44549-201ENSMUST00000208351 577 ntBASIC17.39■□□□□ 0.38
Cacna1aP97445 Gm10175-202ENSMUST00000208752 441 ntBASIC17.39■□□□□ 0.38
Cacna1aP97445 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cacna1aP97445 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms